FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 337 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G +D ++RK V+K+ST + + VDPD + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 337 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 337 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 337 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.206e-25 Identity = 68/190 (35.79%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 148 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 R L+ ++R L+ + +R EL P G ++E+L+ ED A +++ + + ++ + LKPG V +++ + I++ LPSE D V EV E+PT YNDIGGL+KQ+QEL EAI LP+ H E F+K+G+ PPKGVLLYGPPG GKT Sbjct: 26 RQLELQVRTLEADKERLERELSRLRMEMSRLRQP-------PAFAGTLIELLD---EDRA------------------IVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKT 187
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.206e-25 Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 379 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQH 741 V +K++T + +D +L+PG V +N+ ++ I+D LPSE D V MEV+EKP Y IGGLE+Q++E+ E + LP+ E F+K+G+ PPKGVLLYGPPGTGKT V H Sbjct: 87 VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAH 207
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 68/238 (28.57%), Postives = 115/238 (48.32%), Query Frame = 1 Query: 64 MATAMVEDPNLEDD-----------QLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 MATAMV DP + + S DD+ + L ++ ++ + + EL + +P ++G +E+++ N ++ ++T ++ ++ ++ + LKP VG+++ S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G+ PP+GVLLYGPPGTGKT V H+ Sbjct: 1 MATAMVLDPKPAEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNN---------------------AIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 217
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 157 DNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D +R+L+E+++ EL+ PY+ +++IL DG V++++S+ + + V +D KLKPG LV + + I++ LP D+ VK+ EV EKP Y+DIGGL +QI E+ E I LP+ + E F+++G+ PPKGVLLYGPPGTGKT Sbjct: 17 DPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILP---------DGK------------VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |