FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 100.523 bits (249), Expect = 1.016e-20 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKT Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.016e-20 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKT Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.016e-20 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKT Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.016e-20 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKT Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.327e-20 Identity = 45/112 (40.18%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 382 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ ++T + ++ +D + LKP V + + S ++D LP E DS + + DE+P Y D+GGL+ Q QE+ EA+ LP+T + ++++G+ PP+GVLLYGPPGTGKT Sbjct: 71 IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 +D KL P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 115 IDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.264e-20 Identity = 44/112 (39.29%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 382 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ ++T + + ++ +D + LKP V +++ S ++D LP + DS + M +EKP Y D+GGL+ Q QE+ EA+ LP+ + ++++G+ PP+GVLLYGPPGTGKT Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKT 220
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 +D ++KP V + DSY ++ LP++ D V M V++ P Y +GGLEKQI+E+ E I LP+ H E F+ LG+ PKG+LLYGPPGTGKT V H+ Sbjct: 99 IDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 +D K+ P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 115 IDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 433 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V P ++ G VG +++ Y I LP + D V M+V+EKP Y D+GG ++QI+ L E + LP+ ERF KLG+ PPKG++LYGPPGTGKT Sbjct: 133 VSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKT 227 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |