FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 442 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D L+ GD V +N DS+ + L E D+R +AMEVDE P+ Y DIGGL+ Q++E+ EA+ P+ + E+F +GV PP GVLL+GPPGTGKT Sbjct: 110 DTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKT 200
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20 Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 421 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 VVGL V P ++ G VGV++ Y I LP D V M V+EKP Y+D+GG + QI++L E + LP+ ERF LG+ PPKG+LLYGPPGTGKT Sbjct: 156 VVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKT 257
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.602e-20 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 421 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ VD + LKP V +++ S I+ LP E DS + M EKP+ Y D+GGL+ Q QE+ E + LP+ + ++++G+ PP+GVLLYGPPGTGKT Sbjct: 84 ILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.123e-19 Identity = 50/122 (40.98%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 379 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 V++K + + + VD KL P + +SY + LP++ D V M+V++ P Y+ +GGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 81 VLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 202
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.467e-19 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K + V +D + + P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 78 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.467e-19 Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K S + + ++ L PG V + DSY + LP++ D V M+V++ P Y +GGL++QI+E+ E I LP+ H E F+ LG+ PKGV++YGPPGTGKT V H+ Sbjct: 90 KKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHH 213
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K + V +D + + P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K + V +D + + P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K + V +D + + P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 K V++K + V +D + + P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKT V H+ Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |