FC920600

Overview
NameFC920600
Unique NameFC920600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 96/140 (68.57%), Postives = 114/140 (81.43%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V++  KP IQV+ + GETK FSPEEIS+MIL KMKETAE FLG  +KD
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDHEVQGDIKHFPFKVVDKASKPMIQVEYK-GETKTFSPEEISSMILGKMKETAEGFLGTTVKD 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 639
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K++ + D KP IQVQ R GETK F+PEE+S+M+L+KMKE AE++LGK++K
Sbjct:    7 IGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFSDPVVQSDMKHWPFKVITKGDDKPVIQVQFR-GETKTFNPEEVSSMVLSKMKEIAESYLGKQVK 141          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 91/140 (65.00%), Postives = 116/140 (82.86%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +   IGIDLGTTYSCVG+Y++  +EIIANDQGNR TPS+VAFTD+ERLIG++AKNQ A+NP  T+FD KRLIGRKF+D EVQ DMK  P+K++ + GKP  QV+ + GETK F+PEEIS+MILTKM+ETAE++LG  + +
Sbjct:    1 MAPAIGIDLGTTYSCVGIYRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDSAKNQVAINPHNTVFDAKRLIGRKFQDAEVQADMKHFPFKVIEKAGKPVTQVEFK-GETKDFTPEEISSMILTKMRETAESYLGGTVNN 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 92/140 (65.71%), Postives = 116/140 (82.86%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +   +GIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+KI ++ GKP IQV+ + GETK F+PEEIS+M+LTKM+ETAEA+LG  + +
Sbjct:    1 MAPAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFADPEVQADMKHFPFKITDKGGKPVIQVEFK-GETKEFTPEEISSMVLTKMRETAEAYLGGTVNN 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1
Query:  193 ISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++ A E+    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+V+FTD ERLIG+AAKNQAA NP  TIFD+KRLIG ++ D  VQRD+K  PY +VN+  KPY++V ++ GE K F+PEE+S MIL KMK+ AE +LGKK+
Sbjct:   40 VARAAEDHEDYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIKRLIGLQYNDPTVQRDIKHLPYTVVNKGNKPYVEVTVK-GEKKEFTPEEVSGMILGKMKQIAEDYLGKKV 186          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 97/135 (71.85%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+V + D KP IQVQ R GETK F+PEEIS+M+L KMKE AE++LGK++
Sbjct:    7 IGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFR-GETKTFNPEEISSMVLLKMKEVAESYLGKQV 140          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 91/140 (65.00%), Postives = 117/140 (83.57%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +   +GIDLGTTYSCVGV+++  ++IIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F D EVQ DMK  P+K+V++ GKP I+V+ + GETK F+PEEIS+M+LTKM+ETAEAFLG  + +
Sbjct:    1 MAPAVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFKVVDKSGKPIIEVEFK-GETKQFTPEEISSMVLTKMRETAEAFLGGTVNN 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48
Identity = 93/147 (63.27%), Postives = 122/147 (82.99%), Query Frame = 1
Query:  208 EEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            E+  K+GT+IGIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAF+    ERLIG+AAKNQ  +NP+ TIFD KRLIGR + +K VQ+D+K  P+KIV++  KP ++V++   ETK F+PEE+SAM+LTKMK+ AE++LG ++K+
Sbjct:   24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKV-GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKN 169          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48
Identity = 93/137 (67.88%), Postives = 114/137 (83.21%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEEIS+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAGRPKVQVEYK-GETKSFYPEEISSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48
Identity = 96/170 (56.47%), Postives = 128/170 (75.29%), Query Frame = 1
Query:  169 VFFGGLFAISIA----------KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +F  GL A+S            +++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+    +RLIG+AAKNQ  +NP+ TIFD KRLIGR + DK VQ D+K  P+K++++  KP ++V++   + K F+PEE+SAM+L KMKE AE++LGK++K+
Sbjct:    4 LFLLGLIALSAVSVYCEEEEKTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV-GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKN 172          
The following BLAST results are available for this feature:
BLAST of FC920600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_CANAL1.138e-4868.57Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_TRYCR1.138e-4870.59Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_CLAHE1.138e-4865.00Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_AJECA1.138e-4865.71Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
GRP78_KLULA1.486e-4863.5178 kDa glucose-regulated protein homolog OS=Kluyve... [more]
HSP74_TRYBB1.941e-4871.85Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_EMENI1.941e-4865.00Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7D_CAEEL2.535e-4863.27Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
HSP7C_CHICK2.535e-4867.88Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_CAEEL2.535e-4856.47Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]

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Properties
Property NameValue
Genbank descriptionC32010E11EF RVDevelop1 Citrus clementina cDNA clone C32010E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920600 ID=FC920600; Name=FC920600; organism=Citrus clementina; type=EST; length=644bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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