FC920601

Overview
NameFC920601
Unique NameFC920601
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length374
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14197 contig Ccv1_Contig14197:52..425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: AGLU_MUCJA (Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.065e-29
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 3
Query:   42 RPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQWESVPHSARNALGMMYKL 374
            RPF+L+RS+F GSG    HWTGDN   W  LK SI+ +LNF +FGV   G+D+CGF    TEELC RW+E+GAFYPF+R+H N  +   E Y WES   ++R A+   Y++
Sbjct:  545 RPFVLTRSSFPGSGKSVGHWTGDNHSFWPYLKNSIANILNFQMFGVSYSGADVCGFNSDTTEELCTRWMEIGAFYPFARNHNNNAAKDQEPYLWESTAEASRIAINTRYEM 655          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: SUIS_HUMAN (Sucrase-isomaltase, intestinal OS=Homo sapiens GN=SI PE=1 SV=5)

HSP 1 Score: 126.716 bits (317), Expect = 3.523e-29
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 3
Query:   39 KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHAN--YYSPRPELYQWES-VPHSARNALGMMYKL 374
            KR FIL+RSTF GSG +AAHW GDN  +WE +++SI+ ML F +FG+P+VG+DICGF    TEELC RW+++GAFYPFSR+H +  Y    P  +   S +  S+R  L + Y L
Sbjct:  581 KRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELCRRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSSRQYLTIRYTL 695          

HSP 2 Score: 105.916 bits (263), Expect = 6.436e-23
Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL    GKR  ++SRST+  SG +  HW GDN   W+++  SI  M+ F +FG+   G+DICGF+      LC RW+++GAFYP+SR+H    + R +   W E+    +RN L + Y L
Sbjct: 1470 ALQKTTGKRGIVISRSTYPTSGRWGGHWLGDNYARWDNMDKSIIGMMEFSLFGISYTGADICGFFNNSEYHLCTRWMQLGAFYPYSRNHNIANTRRQDPASWNETFAEMSRNILNIRYTL 1589          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: LYAG_RAT (Lysosomal alpha-glucosidase OS=Rattus norvegicus GN=Gaa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.523e-29
Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL+   G RPF++SRSTF G G YA HWTGD   +WE L YS+  +L F + GVP+VG+DICGF    TEELC RW ++GAFYPF R+H +  S   E Y++ E+   + R A  + Y L
Sbjct:  586 ALVKTRGTRPFVISRSTFAGHGRYAGHWTGDVWSSWEHLAYSVPEILQFNLLGVPLVGADICGFQGNTTEELCVRWTQLGAFYPFMRNHNDLNSLPQEPYRFSETAQQAMRKAFTLRYAL 705          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: MGA_HUMAN (Maltase-glucoamylase, intestinal OS=Homo sapiens GN=MGAM PE=1 SV=5)

HSP 1 Score: 126.331 bits (316), Expect = 4.601e-29
Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 3
Query:   39 KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDH--ANYYSPRPELYQWES-VPHSARNALGMMYKL 374
            KR FIL+RSTF GSG +AAHW GDN  TW+DL++SI  +L F +FG+PMVG DICGF     EELC RW+++GAFYPFSR+H    Y    P  +  +S + +S+R+ L + Y L
Sbjct:  605 KRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIRYTL 719          

HSP 2 Score: 107.457 bits (267), Expect = 2.212e-23
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQWE-SVPHSARNALGMMYKL 374
            A+  + G+R  +++RSTF  SG +A HW GDN   W+ LK SI  M+ F +FG+   G+DICGF+     E+C RW+++GAFYPFSR+H    + R +   W+ +  + +R  L   Y L
Sbjct: 1496 AVQEVTGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPVSWDVAFVNISRTVLQTRYTL 1615          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: SUIS_SUNMU (Sucrase-isomaltase, intestinal OS=Suncus murinus GN=SI PE=2 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 7.849e-29
Identity = 58/115 (50.43%), Postives = 81/115 (70.43%), Query Frame = 3
Query:   39 KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDH-ANYYSPRPELY--QWESVPHSARNALGMMYKL 374
            KR FIL+RSTF G+G +A HW GDN  +WE +++SI+ ML FG+FG+P +G+DICGF    TEELC RW+++GAFYP+ RDH A  Y P+   Y  Q   + +++R+ L + Y L
Sbjct:  567 KRSFILTRSTFAGTGKHATHWLGDNTPSWEHMEWSITPMLEFGLFGMPFIGADICGFVVDTTEELCRRWMQIGAFYPYFRDHNAGGYMPQDPAYFGQDSLLVNTSRHYLDIWYTL 681          

HSP 2 Score: 104.76 bits (260), Expect = 1.434e-22
Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL    GKR  ++SRST+  +G +A HW GDN   W+ +  SI  M+ F +FG+   G+DICGF+     ELC RW++VGAFYP+SR+H    + R +   W E+    + + L + Y L
Sbjct: 1456 ALQKTTGKRGIVISRSTYPSAGRWAGHWLGDNYANWDKIGKSIIGMMEFSLFGISFTGADICGFFNNSDYELCARWMQVGAFYPYSRNHNITDTRRQDPVSWNETFASMSTDILNIRYNL 1575          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: LYAG_HUMAN (Lysosomal alpha-glucosidase OS=Homo sapiens GN=GAA PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL+   G RPF++SRSTF G G YA HWTGD   +WE L  S+  +L F + GVP+VG+D+CGF    +EELC RW ++GAFYPF R+H +  S   E Y + E    + R AL + Y L
Sbjct:  586 ALVKARGTRPFVISRSTFAGHGRYAGHWTGDVWSSWEQLASSVPEILQFNLLGVPLVGADVCGFLGNTSEELCVRWTQLGAFYPFMRNHNSLLSLPQEPYSFSEPAQQAMRKALTLRYAL 705          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: LYAG_BOVIN (Lysosomal alpha-glucosidase OS=Bos taurus GN=GAA PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL+   G RPF++SRSTF G G Y+ HWTGD    WE L YS+  +L F + GVP+VG+DICGF    +EELC RW ++GAFYPF R+H    S   E Y++ E+   + R A  + Y L
Sbjct:  573 ALVKARGMRPFVISRSTFAGHGRYSGHWTGDVWSNWEQLSYSVPEILLFNLLGVPLVGADICGFLGNTSEELCVRWTQLGAFYPFMRNHNALNSQPQEPYRFSETAQQAMRKAFTLRYVL 692          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: AGLU_ASPNG (Alpha-glucosidase OS=Aspergillus niger GN=aglA PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 3
Query:   39 KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQWESVPHSARNALGMMYKL 374
            +RPFI+ RSTF GSG +A HW GDN   W  + YSIS  L+F +FG+PM G+D CGF     EELCNRW+++ AF+PF R+H    +   E Y+W SV  + ++A+ + Y +
Sbjct:  637 RRPFIIGRSTFAGSGKWAGHWGGDNYSKWWSMYYSISQALSFSLFGIPMFGADTCGFNGNSDEELCNRWMQLSAFFPFYRNHNELSTIPQEPYRWASVIEATKSAMRIRYAI 748          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: LYAG_PONAB (Lysosomal alpha-glucosidase OS=Pongo abelii GN=GAA PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.933e-27
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRPELYQW-ESVPHSARNALGMMYKL 374
            AL+   G RPF++SRSTF G G YA HWTGD   +WE L  S+  +L F + GVP+VG+D+CGF    +EELC RW ++GAFYPF R+H    +   E Y + E    + R AL + Y L
Sbjct:  586 ALVKARGTRPFVISRSTFAGHGRYAGHWTGDVWSSWEQLASSVPEILQFNLLGVPLVGADVCGFLGNTSEELCVRWTQLGAFYPFMRNHNGLLNLPQEPYSFSEPAQQAMRKALTLRYAL 705          
BLAST of FC920601 vs. ExPASy Swiss-Prot
Match: SUIS_RAT (Sucrase-isomaltase, intestinal OS=Rattus norvegicus GN=Si PE=1 SV=5)

HSP 1 Score: 120.553 bits (301), Expect = 2.525e-27
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 3
Query:   39 KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDH--ANYYSPRPELYQWESVPH 338
            KR FIL+RSTF GSG +A HW GDN  +WE +++SI+ ML FGIFG+P+VG+  CGF    TEELC RW+++GAFYPFSR+H    Y    P  +  +S  H
Sbjct:  592 KRSFILTRSTFGGSGRHANHWLGDNTASWEQMEWSITGMLEFGIFGMPLVGATSCGFLADTTEELCRRWMQLGAFYPFSRNHNAEGYMEQDPAYFGQDSSRH 693          

HSP 2 Score: 81.2629 bits (199), Expect = 1.698e-15
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 3
Query:   18 ALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICG-FYPAPTEELCNRWIEVGAFYPFSRD 281
            AL    G R  ++SRST+  +G +  HW GDN  TW++L+ S+  ML   +FG+P +G+DICG F+ +    L    I+VGAFYP+ R+
Sbjct: 1482 ALQNTTGLRGIVISRSTYPTTGRWGGHWLGDNYTTWDNLEKSLIGMLELNLFGIPYIGADICGVFHDSGYPSLYFVGIQVGAFYPYPRE 1570          
The following BLAST results are available for this feature:
BLAST of FC920601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
AGLU_MUCJA2.065e-2951.35Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1[more]
SUIS_HUMAN3.523e-2952.17Sucrase-isomaltase, intestinal OS=Homo sapiens GN=... [more]
LYAG_RAT3.523e-2950.00Lysosomal alpha-glucosidase OS=Rattus norvegicus G... [more]
MGA_HUMAN4.601e-2953.04Maltase-glucoamylase, intestinal OS=Homo sapiens G... [more]
SUIS_SUNMU7.849e-2950.43Sucrase-isomaltase, intestinal OS=Suncus murinus G... [more]
LYAG_HUMAN6.644e-2848.33Lysosomal alpha-glucosidase OS=Homo sapiens GN=GAA... [more]
LYAG_BOVIN6.644e-2848.33Lysosomal alpha-glucosidase OS=Bos taurus GN=GAA P... [more]
AGLU_ASPNG6.644e-2847.32Alpha-glucosidase OS=Aspergillus niger GN=aglA PE=... [more]
LYAG_PONAB1.933e-2747.50Lysosomal alpha-glucosidase OS=Pongo abelii GN=GAA... [more]
SUIS_RAT2.525e-2753.92Sucrase-isomaltase, intestinal OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionC32010E12EF RVDevelop1 Citrus clementina cDNA clone C32010E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920601 ID=FC920601; Name=FC920601; organism=Citrus clementina; type=EST; length=374bp
ATCGCCGGGCATGAGTAGCTCTTCTAGGGCTCGAAGGCAAGAGGCCATTC
ATATTATCACGCTCTACTTTTGTTGGTTCTGGTCATTATGCCGCACACTG
GACGGGTGATAATAAGGGAACATGGGAAGATCTAAAGTATTCTATTTCAA
CCATGCTGAACTTCGGCATATTTGGGGTTCCGATGGTTGGTTCCGATATA
TGTGGGTTCTATCCTGCCCCAACAGAAGAGCTTTGTAACCGATGGATAGA
AGTAGGTGCATTCTATCCGTTCTCAAGGGATCATGCAAACTACTACTCCC
CAAGACCGGAGCTTTATCAGTGGGAGTCAGTACCACACTCCGCCCGAAAT
GCTCTGGGTATGATGTATAAACTA
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