FC920605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUSB_PROVU (tRNA-dihydrouridine synthase B OS=Proteus vulgaris GN=dusB PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 46 QMGTSDAVRALTAAKMVCKDVAAI-NINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRL--SKSSQDTVELARQIEKTGVSALAVHGR 342 Q+ SD V AAK+ A I +INMGCP G+ALL P+L+ +IL+ + +DVP+T KIR S ++ VE+A+ E+ G+ AL +HGR Sbjct: 70 QIAGSDPVDMAAAAKINADSGAQIIDINMGCPAKKVNKKLAGSALLRHPDLVAEILSAVVNAVDVPVTLKIRTGWSPDERNCVEIAKLAERCGIQALTIHGR 171
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUSA_VIBVU (tRNA-dihydrouridine synthase A OS=Vibrio vulnificus GN=dusA PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 7 FRTCHQERNHVVFQMGTSDAVRALTAAKMVC-KDVAAININMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRLSKSSQDTVELARQI-----EKTGVSALAVHGR 342 F +QE + V Q+G S+ T AK+ + +N+N+GCP +G GA L+++P+L+ D + +K +D+P+T K R+ QD+ E EK G +H R Sbjct: 50 FLAYNQEEHPVALQLGGSNPQDLATCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPQLVADCVAAMKEVVDIPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHAR 167
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUS1L_RAT (tRNA-dihydrouridine synthase 1-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.522e-11 Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 16 CHQERNHVVFQMGTSDAVRALTAAKMVCKDVAAININMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRLSKSSQDTVELARQIEKTGVSALAVHGRPSLKK 357 C ++R +V Q +D + AA + AI++N+GCP+ + G GA L + +L+ ++ + L VP+TCKIR+ TV A+ +EK G L VHGR +K Sbjct: 70 CPEDRPLIV-QFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLLQRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQK 182
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUS1L_MOUSE (tRNA-dihydrouridine synthase 1-like OS=Mus musculus GN=Dus1l PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.522e-11 Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 16 CHQERNHVVFQMGTSDAVRALTAAKMVCKDVAAININMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRLSKSSQDTVELARQIEKTGVSALAVHGRPSLKK 357 C ++R +V Q +D + AA + AI++N+GCP+ + G GA L + +L+ ++ + L VP+TCKIR+ TV A+ +EK G L VHGR +K Sbjct: 70 CPEDRPLIV-QFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQK 182
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUS1L_HUMAN (tRNA-dihydrouridine synthase 1-like OS=Homo sapiens GN=DUS1L PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.522e-11 Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 16 CHQERNHVVFQMGTSDAVRALTAAKMVCKDVAAININMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRLSKSSQDTVELARQIEKTGVSALAVHGRPSLKK 357 C ++R +V Q +D + AA + AI++N+GCP+ + G GA L + +L+ ++ + L VP+TCKIR+ TV A+ +EK G L VHGR +K Sbjct: 70 CPEDRPLIV-QFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQK 182
BLAST of FC920605 vs. ExPASy Swiss-Prot
Match: DUSB_HAEDU (tRNA-dihydrouridine synthase B OS=Haemophilus ducreyi GN=dusB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.824e-11 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 19 HQERNHVVFQMGTSDAVRALTAAKM-VCKDVAAININMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPLTCKIRL--SKSSQDTVELARQIEKTGVSALAVHGR 342 H E Q+ S+ AAK+ V I+INMGCP G+ALL +P+L+ IL + +DVP+T KIR K+ ++ +++A+ EK G+SAL +HGR Sbjct: 61 HAEIGINAVQIAGSEPTEIAEAAKINVAYGAQIIDINMGCPAKKVNKKMAGSALLREPQLVARILDAVVNAVDVPVTLKIRTGWDKTHKNFLQIAKIAEKAGISALTIHGR 171 The following BLAST results are available for this feature:
BLAST of FC920605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920605 ID=FC920605; Name=FC920605; organism=Citrus clementina; type=EST; length=358bpback to top |