FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NEIMB (Seryl-tRNA synthetase OS=Neisseria meningitidis serogroup B GN=serS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29 Identity = 78/245 (31.84%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-----QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ + + VG P F+F +KDH LG+ L + DF+ A++SG++F ++ + L L + L + ++ G+T TP IV + ++ G P+ A + G D Q LI TAE+ + DSI+ LPLK A S CF L R HQF K+EM PE+S EE++ E++ +L L ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 114 PAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGL-DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NEIM0 (Seryl-tRNA synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=serS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29 Identity = 78/245 (31.84%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-----QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ + + VG P F+F +KDH LG+ L + DF+ A++SG++F ++ + L L + L + ++ G+T TP IV + ++ G P+ A + G D Q LI TAE+ + DSI+ LPLK A S CF L R HQF K+EM PE+S EE++ E++ +L L ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 114 PAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGL-DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_LACH4 (Seryl-tRNA synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=serS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 PVGGEDC--SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G +D +RK P+ F+F K H+ +G L I D+D A++VSG++F Y +LE + N+ L E K G+T + P +V + ++ G P+ + VY+I + D LI TAE+P+ + I+ E+ LP+ A S F L R+H+F K+EM C+P+ES E+L E L LGL + V ++T D + R +D+E WMP +Y EIS Sbjct: 113 PIGPDDSYNEEVRKW-NEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPK-FHEDVYTIVDNDDPDKPRDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSARTYDLEVWMPAQDKYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACSK (Seryl-tRNA synthetase OS=Bacillus clausii (strain KSM-K16) GN=serS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29 Identity = 77/225 (34.22%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G+ F+F + H++LG ALDI DF+ AA+V+GS+F K LE LIN+ + + +T + P IV + + G P+ V+ I D LI TAE+PV +H +L LP+ Y A+S F L R HQF+K+E+ F PE+S++ E + E++ LGL ++ V + T DL + + +D+E WMP Y EIS Sbjct: 128 GDVPDFSFEPRPHWELGTALDILDFERAAKVTGSRFTVYKGLGARLERALINFMMDMHATEHDYTEVLPPYIVNRASMIGTGQLPK-FEEDVFKISEEDYFLIPTAEVPVTNLHRGEVLQGEQLPIAYNAYSTNFRSEAGSAGRDTRGLIRQHQFNKVELVRFSLPEDSNNQLEIMTTHAENVLKRLGLPYRVVTLCTGDLTFASTKTYDLEVWMPSANTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THICR (Seryl-tRNA synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 78/247 (31.58%), Postives = 117/247 (47.37%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIE--------GADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ED ++ + G P F+F +KDH L +A +D DAA +++ S+F LK L+ L + L G+ + P +V + G P+ +Y I+ D LI TAE+PV + D I+ E LPLK+ A + CF L R HQF K+EM P++S E L + E + L L ++ + + T D+G A + +D+E W+PG Y EIS Sbjct: 112 PVGNSEDDNVEVRQWGTPKTFDFDIKDHVDLAEARGWYDNDAAVKIASSRFSVLKGPMAKLQRALTQFMLDSHTDAGYEEVYVPFLVNQDSLHGTGQLPK-FEADLYKIDKHEEHDTSDRDLYLIPTAEVPVTNLFRDEIIDEDTLPLKFTAHTPCFRSEAGSYGRDTKGLIRQHQFEKVEMVQIVHPDQSYEALESLTQQAESILQKLELPYRVMSLCTGDIGFSAAKTYDLEVWLPGQQAYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHEDO (Seryl-tRNA synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 78/229 (34.06%), Postives = 117/229 (51.09%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+FPVKDH LG+AL DF +A +++GS+F +K + L L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ + D+I+ S LPLK+ A + CF L R HQF K+E+ +PE+S EEL E + LGL ++T+ + T D+G A + +D+E W+P Y EIS Sbjct: 127 GTPRSFDFPVKDHLDLGEALGGLDFKSAVKITGSRFIVMKGQLARLNRALGQFMLDLHTQEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNLVRDTIVEVSDLPLKFTAQTSCFRSEAGSYGRDTRGLIRQHQFEKVELVQIVKPEDSMQALEELTLHAEKVLQLLGLPYRTMLLCTGDMGFGASKTYDLEVWLPAQNTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RICAH (Seryl-tRNA synthetase OS=Rickettsia akari (strain Hartford) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 72/224 (32.14%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 46 NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 NP+ N K HF+LG L++ DF+ A++SG++F LK + LE LIN+ + K F ++ P +VR + + G P+ A + G LI TAE+ + I D+I+ LP++Y A++ CF + R+HQF K+E+ PEES HE + E + L L ++ + + T D+G A + +D+E W+PG +Y EI+ Sbjct: 130 NPNALN---KQHFELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALINFMIDVHTKEFNFFEMSPPVLVRDNAMYNSGQLPKFAEESFATTNGYR--LIPTAEVFLVNIVADTIIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKHEHEYITNSSETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIA 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RICAE (Seryl-tRNA synthetase OS=Rickettsia africae (strain ESF-5) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 71/224 (31.70%), Postives = 117/224 (52.23%), Query Frame = 1 Query: 46 NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 NP+ N K HF+LG L++ DF+ A++SG++F LK + LE LIN+ + K F ++ P +VR + + G P+ A + G LI TAE+ + + D+I+ LP++Y A++ CF + R+HQF K+E+ PEES + HE + E + L L ++ + + T D+G A + +D+E W+PG +Y EI+ Sbjct: 130 NPNALN---KQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALINFMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYR--LIPTAEVSLVNMVADTIIPREKLPIRYVAYTPCFRSEAGSSGKDTRGMIRLHQFGKVELVSITTPEESTNEHEYITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEIWLPGQKQYREIA 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_OLICO (Seryl-tRNA synthetase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 77/251 (30.68%), Postives = 125/251 (49.80%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTV-GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYS----IEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGL-------GRYGEIS 714 P G ++ ++ V G P + F K+H LG+ L DF+ AA++SG++F LK+ LE + + L + G+T + P +VR + P+ Q + EG LI TAE+P+ + +SIL E LP++ A + CF + R HQF+K+E+ P+ES + HE ++ E++ LGLH++ + + T D+G + + +D+E WMPG G Y EIS Sbjct: 114 PEGADEHGNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLSGARFVVLKSGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLDAEGQGYWLIPTAEVPLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPDESRNEHERMLSCAEEVLKRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQISSQGEGGMYREIS 364
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NEIMF (Seryl-tRNA synthetase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 78/245 (31.84%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-----QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ + + VG P F+F +KDH LG+ L + DF+ A++SG++F ++ + L L + L + ++ G+T TP IV + ++ G P+ A + G D Q LI TAE+ + DSI+ LPLK A S CF L R HQF K+EM PE+S EE++ E++ +L L ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 114 PFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGL-DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREIS 357 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |