FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THELT (Seryl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=serS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 74/225 (32.89%), Postives = 114/225 (50.67%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G+P F++ + H+ LG +L + DFD AA++SGS+F + LE L N+ L K G+T + P IV+ + G P+ + Y IE D LI TAE+P+ + + IL E LPL Y A++ C+ + R HQF K+E+ PE S E L+ E++ L L ++ + + + DLG A + +D+E W+P Y EIS Sbjct: 130 GDPKKFDYNPQAHWDLGPSLGLMDFDRAAKLSGSRFTVMYGMFAKLERALTNFMLDMHTKEHGYTEVWLPHIVKRETMTITGQLPK-FEEEAYRIEADDLFLIPTAEVPLVALRSNEILEEKDLPLLYTAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFEDLETLVSHAEEVLRRLELPYRVIQLCSGDLGFGAAKTYDLEVWLPSYNSYKEIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SYNY3 (Seryl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=serS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 70/212 (33.02%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 H+++G+ L I D + +V+ S+F L LE LIN+ L I G+ + P +V S + G P+ A + + G D LI TAE+PV ++ D +L LP+K+ A++ CF L R+HQF+K+E+ +PEES + H+ L+ E + +L L ++ V++ T DLG A + +D+E W+P Y EIS Sbjct: 148 HWEIGEKLGIIDSERGVKVAQSRFISLMKAGAALERALINFMLERHIGVGYQEIMPPILVNSDSLLGTGQLPKFAE-ESFQCRGDDLWLIPTAEVPVTNLYRDEVLDLEQLPIKHCAYTPCFRREAGSYGRDTKGLIRLHQFNKVELVKLVKPEESAAEHQALVADAEAILQALELPYRVVELCTGDLGFGAAKCYDLEVWLPSANTYREIS 358
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_STAS1 (Seryl-tRNA synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=serS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 73/240 (30.42%), Postives = 124/240 (51.67%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G D I K G P F F K H+ L + L++ DF+ AA+VSG++F +L + LE L+N+ +++ + G+T + P++V + + G P+ ++ +E I TAE+P+ + + I++ +LP K+ A S C+ L R+HQF K+EM +PE+S E++ E + LGL ++ V + T D+G + + +D+E W+P Y EIS Sbjct: 113 PEGATDEDNIEVKRWGTPRTFEFEDKAHWDLVEELEMVDFERAAKVSGARFVFLTGDGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADSMYGTGQLPK-FEEDLFKVEKEGLYTIPTAEVPLTNYYRNEIIAPDVLPAKFTAQSACYRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWQALEDMTHHAEAILEELGLPYRRVILCTGDIGFGSSKTYDLEVWLPSYNDYKEIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_GLUDA (Seryl-tRNA synthetase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=serS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 75/235 (31.91%), Postives = 117/235 (49.79%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E +++ VG F FP ++HF LG+AL + DF+ A ++SG++F L+ +E L + L V + G+T P +V + + P+ A+ + +G + LI TAE+P+ IL S LP + A S CF + R HQF K+EM P +SD+ HE + R E + LG+ ++ + + D G A R FD+EAW+PG + EIS Sbjct: 117 ESANVVVHQVGERRDFAFPPREHFALGEALGLMDFETAGKLSGARFVVLRGALARMERALGQFMLDLHVQEHGYTETAVPVLVNEAAMFGTDKLPKFADQSFRTEDG--RWLIPTAEVPLTASVAGDILPASALPRRMVALSSCFRSEAGAAGRDTRGMLRQHQFQKVEMVSITAPGDSDAEHERMTRCAEKVLERLGIPYRRMLLCAGDTGFGAARTFDLEAWLPGQDAWREIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_AGRT5 (Seryl-tRNA synthetase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=serS PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 71/235 (30.21%), Postives = 121/235 (51.49%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E +++ + G +N K+HF++G+AL DF+ AA++SGS+F L ++ LE L + + + G+T +++P +VR + G P+ A + +G + LI TAE+ + + IL + LPL++ A + F + R HQF K E+ E + + HE + E++ LGLHF+T+ + T D+G A + +D+E W+PG Y EIS Sbjct: 119 EHDNVVARVTGQKPGWNHAAKEHFEIGEALGYMDFERAAKLSGSRFTVLTSQLARLERALGQFMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFAEDLFRTTDG--RWLIPTAEVTLTNLVSGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHERMTACAEEVLKRLGLHFRTLTLCTGDMGFSARKTYDLEVWLPGQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHESH (Seryl-tRNA synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 76/244 (31.15%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ + + G P FNF VKDH +LG+ L DF AA +++G++F +K + + L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ I D+I+ E+ LP+K A + CF L R HQF K+E+ +PE+S + + L E + L L ++TV + T D+G + + FD+E W+P Y EIS Sbjct: 112 PAGADESENVEVRRWGTPKEFNFEVKDHVELGETLGGLDFKAAVKITGTRFIIMKGQIARMNRALAQFMLDLHTTEHGYTEAYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNIARDTIIDEADLPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALDSLTGHAETVLQKLELPYRTVVLCTGDMGFGSSKTFDIEVWLPAQNTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHELP (Seryl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 76/244 (31.15%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ++ + + G P F+F VKDH LG+ DF +A +++GS+F +K + + L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ + D+I+ E LP+K A + CF L R HQF K+E+ +PE+S + E L + E + LGL ++TV + T D+G A + FD+E W+P Y EIS Sbjct: 112 PIGADENDNVEIRRWGEPKQFDFDVKDHVDLGEQHAGLDFKSAVKITGSRFIVMKGQIARMHRALTQFMLDLHTTEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNLARDTIIDEDELPIKMTAHTACFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALESLTQHAETVLQRLGLPYRTVVLCTGDMGFGAAKTFDIEVWLPAQNTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PELPD (Seryl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 74/246 (30.08%), Postives = 124/246 (50.41%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEISVHQLYG 732 PVG E+ ++ + G P + F K H+++G+ L I DF+ A+++G++F + +E LI++ L G+ + P +V + G P+ ++ + + LI TAE+PV IH IL +S LP++YAA++ CF L R HQF+K+E+ F P +S E+L E + L L ++ + + + D+G A R +D+E W+PG Y EIS +G Sbjct: 111 PVGKSENDNVEIRKWGTPGSYGFTPKPHWEIGEELGILDFECGAKLTGARFTLSRGAGARMERALISFMLDLHTASHGYLEVLPPFMVNRDSMTGTGQLPK-FEEDLFKMTDPEYFLIPTAEVPVTNIHRGEILKKSDLPIRYAAYTPCFRREAGSYGKDTRGLIRQHQFNKVELVKFSHPSQSAEELEKLTADAEKVLQLLELPYRVMALCSADIGFSAARTYDLEVWLPGQNCYREISSCSCFG 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METEP (Seryl-tRNA synthetase OS=Methylobacterium extorquens (strain PA1) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 70/215 (32.56%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 73 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + HF+LG+A + DF+AAA++SGS+F LK + LE L + L + G+T + P +VR + P+ + Q + G + LI TAE+P+ + +SIL+E LPL++ A + CF + R HQF+K+E+ PE+S HE ++ E + L L ++ + + T D+G + + +D+E W+PG Y EIS Sbjct: 139 RQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQFMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAA--GENFWLIPTAEVPLTNLVRESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHERMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METC4 (Seryl-tRNA synthetase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 70/215 (32.56%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 73 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + HF+LG+A + DF+AAA++SGS+F LK + LE L + L + G+T + P +VR + P+ + Q + G + LI TAE+P+ + +SIL+E LPL++ A + CF + R HQF+K+E+ PE+S HE ++ E + L L ++ + + T D+G + + +D+E W+PG Y EIS Sbjct: 139 RQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQFMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAA--GENFWLIPTAEVPLTNLVRESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHERMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREIS 351 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |