FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METBF (Seryl-tRNA synthetase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=serS1 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 74/239 (30.96%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E+ + + + VG P F F K H+++G+ALDI DF+ A++SG F K LE L+N+ L ++G+ + P ++ + G P+ + +G L TAE+PV + MD + + LP+ A++ CF + R HQF+K+E+ F +PE S E+L E++ L L ++ V++ T D+G A + +D+E W+P +Y EIS Sbjct: 113 PVGKDENDNPVVRIVGEPRKFTFTPKPHWEIGEALDILDFEKGAKISGQGFTVYKGMGAKLERALVNFMLEVHARQGYLEVFPPVLINEKAMTGTGQLPKFKDDMYLCTDG--YYLAPTAEVPVTNLFMDDYIEK--LPVFLTAYTACFRREAGKHGQDTRGIIRQHQFNKVELVKFVKPETSYDELEKLTNDAEEILKLLKLPYRVVNLCTGDIGFSAAKTYDLEVWVPTQEKYREIS 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_GEOSF (Seryl-tRNA synthetase OS=Geobacter sp. (strain FRC-32) GN=serS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 77/240 (32.08%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTV-GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG + + V G +F K H+++G+ LDI DF+ A+++G++F K LE L+N+ L + + + P +V + G P+ + ++ + D LI TAE+PV IH IL S LPL Y A++ CF L R HQF+K+E+ F P S + ++L+ E++ L L ++ V++ T D+G A R FD+E W+PG Y EIS Sbjct: 111 PVGASEADNVEIRVWGEKPHLDFTPKPHWEIGEDLDILDFERGAKLTGARFTLYKGLGARLERALVNFMLDLHTGRHNYLEMLPPFMVNRESMTGTGQLPKFED-DLFHLGEVDYFLIPTAEVPVTNIHRGEILKGSELPLCYTAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFVHPGHSYAELDKLLDNAEEVLRLLKLPYRVVELCTGDIGFSAARTFDIEVWLPGQDCYREIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYSC_CAEEL (Probable seryl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=srs-2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 70/224 (31.25%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA-----------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSY--HEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 H L +D FD + V+G + Y+LK V LE +I L + +G+ PL TP +R V+++ Q + ++Y + ++ LI T+E P+ H + + E+ LP+KYA S CF ++RVHQF K+E FV C P +++S+ +E+I E Y L + ++ V++ + +L A +KFD+EAW PG G Y E+ Sbjct: 170 HVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVA-QLSQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAYREL 392
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RALSO (Seryl-tRNA synthetase OS=Ralstonia solanacearum GN=serS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 80/238 (33.61%), Postives = 117/238 (49.16%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPR------------GANTQVYSIEGADQC-LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+FPVKDH LG L + DFD AA++SGS+F LK L L + L + + G+T P IV ++ + G P+ G T+ + E + LI TAE+P+ + D I++ LP+K+AA S CF + R HQF K+EM QPE S + + E++ L L F+TV + T D+G + + +D+E W+P Y EIS Sbjct: 127 GTPRAFDFPVKDHVDLGAGLGL-DFDVAAKLSGSRFAVLKGPVARLHRALAQFMLDTHTQEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGQATEAEAGEHVENFYLIPTAEVPLTNLVRDEIVAGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIVQPETSFEALDAMTHHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYREIS 363
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ORITB (Seryl-tRNA synthetase OS=Orientia tsutsugamushi (strain Boryong) GN=serS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 74/234 (31.62%), Postives = 120/234 (51.28%), Query Frame = 1 Query: 16 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 D + + K G FP K H+++GK L + DF+ A ++SGS+F LK++ LE LIN+ + + F ++ P +V+ + G P+ A+ + G LI TAE+P+ I ++ L E LP++ AF+ CF + R+HQF K+E+F PEES+ E L E + L L ++ V + + D+G A++ +D+E W+P Y EIS Sbjct: 119 DMNKVLKECGTIQNIKFP-KHHYEIGKNLGMIDFNTATKMSGSRFVILKHDLAKLERALINFMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYR--LIPTAEVPLTNIFANTTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPEESNREFEYLTTAAETILKKLCLPYRVVLLCSGDIGFAAHKTYDLEVWLPAQNCYREIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NEIG1 (Seryl-tRNA synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=serS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 75/233 (32.19%), Postives = 118/233 (50.64%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-----QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + VG P F+F +KDH LG+ L + DF+ A++SG++F ++ + L L + L + +++ G+T TP IV + ++ G P+ A + G D Q LI TAE+ + SI+ LPLK A S CF L R HQF K+EM PE+S EE++ E++ +L L ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 126 RKVGTPREFDFEIKDHVDLGEPLGL-DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHMLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MICAN (Seryl-tRNA synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=serS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 68/212 (32.08%), Postives = 111/212 (52.36%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 H+++G+ L I DF+ A +++ S+F L LE LIN+ L I G+T + P ++ S + G P+ A + + + L TAE+PV ++ D ILS LP+K+ A++ CF L R+HQF+K+EM P+ S HE L+ E + +L L ++ +++ + DLG A + +D+E W+P Y EIS Sbjct: 145 HWEIGEKLGILDFERAVKIAQSRFVNLIALGAALERALINFMLDRHIVAGYTEVLPPILINSDSLRGTGQLPKFAE-ESFKCRDDELWLAPTAEVPVTNLYRDEILSSEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVEMVKIVHPDASAQEHESLVANAEAILQALQLPYRVIELCSGDLGFSAAKCYDLEVWLPSANTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ACICJ (Seryl-tRNA synthetase OS=Acidiphilium cryptum (strain JF-5) GN=serS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 73/235 (31.06%), Postives = 120/235 (51.06%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E ++ +K VG P F+F + HF+LG+AL + DF AA+++G++F L+ + LE L + L V + G+T ++ P +V + + G P+ A + +G + LI TAE+P+ + IL + LPL+ A + F + R HQF K+E+ PE S HE + E + LGL ++ + + D G + + +D+E W+PG G Y EIS Sbjct: 124 ETANVEQKRVGAPPSFDFEARQHFELGEALGLMDFAGAAKLAGARFTVLRGDLARLERALGQFMLDLHVNEHGYTEVSPPLLVNDATMYGTGQLPKFAEDLFRTTDG--RWLIPTAEVPLTNLAAGEILDAASLPLRMTALTPSFRSEAGSAGRDTRGMLRQHQFWKVELVSLTTPEASADEHERMTSCAESVLERLGLPYRRMLLCAGDTGFSSAKTYDLEVWLPGQGAYREIS 356
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SILST (Seryl-tRNA synthetase OS=Silicibacter sp. (strain TM1040) GN=serS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28 Identity = 70/235 (29.79%), Postives = 116/235 (49.36%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED ++ K G+ F+F K+HF++ DF+ AA++SGS+F LK + L + + + V + G T + +P +VR + P+ + G L+ T+E+P+ ++ E+ LP++Y A + CF + R HQF K+EM PE SD + ++ E + LG+ ++TV + T D+G A R +D+EAW+PG Y EIS Sbjct: 119 EDDNVEVKRWGDVPAFDFDPKEHFEIAGVAKAMDFETAAKISGSRFVVLKGAVARIHRALAQFMVDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGEDSYQTTNG--WWLVPTSEVPLTYSVAGDVIDEAALPIRYTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSIVHPETSDEEQKRMLGCAEGILEKLGIPYRTVVLCTGDMGFGARRTYDIEAWVPGQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NEIG2 (Seryl-tRNA synthetase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=serS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28 Identity = 75/233 (32.19%), Postives = 117/233 (50.21%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-----QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + VG P F+F +KDH LG+ L + DF+ A++SG++F ++ + L L + L + ++ G+T TP IV + ++ G P+ A + G D Q LI TAE+ + SI+ LPLK A S CF L R HQF K+EM PE+S EE++ E++ +L L ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 126 RKVGTPREFDFEIKDHVDLGEPLGL-DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREIS 357 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |