FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BEII9 (Seryl-tRNA synthetase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=serS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28 Identity = 73/236 (30.93%), Postives = 117/236 (49.58%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPR--------GANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + VG VF+F K+HF +G+ L + DF+AAA++SG++F K LE L + L + G+T + P + R + P+ A G LI T+E+ + + ++IL E LPL++ A + CF + R HQF+K E+ PEE+ HE ++ E++ LGL ++ V + T D+G + + +D+E W+PG GRY EIS Sbjct: 126 RVVGEKPVFSFVPKEHFDIGEGLGLMDFEAAAKLSGARFVVNKGPLARLERALGQFMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAGDLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREIS 361
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS2_LACPL (Seryl-tRNA synthetase 2 OS=Lactobacillus plantarum GN=serS2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28 Identity = 73/234 (31.20%), Postives = 114/234 (48.72%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E+ ++ + +G P F+F K H+ +G+ L I DF+ A+VSGS+F Y + LE + N+ L + G+T + P +V + G P+ + I D LI TAE+P+ + D ++ LP+ + A S F L R+HQF+K+EM F +PE+S E+L E L LGL + + + T D+ A D+E W P +Y EIS Sbjct: 118 EEDAVELRRIGTPRHFDFTPKAHWDIGEDLGILDFERGAKVSGSRFLYYVGDGAKLERAVYNFFLDQHEAEGYTEVLPPYMVTDESMYGTGQFPK-FKEDAFRITTQDLTLIPTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFPEQDKYREIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEEB (Seryl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 69/223 (30.94%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 64 FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEISVHQLYG 732 +P + H+ +G L ++D + + +V+ S+F L LE LI + L +RG+ + P +V ++ + G P+ A + + D LI TAE+PV ++ D IL+ LP+ + A++ CF L R+HQF+K+E+ F PE S + HE L+ E + +L L ++ +++ T DLG A + +D+E W+P G Y EIS +G Sbjct: 139 YPCQPHWDIGTRLGLWDVERSVKVAQSRFVTLLGLGAALERALIQFMLDSHRERGYVEVLPPLLVNTASLTGTGQLPKFAE-ESFRCADDDLWLIPTAEVPVTNLYRDEILAADQLPIYHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKFVHPETSAAEHEALVADAEFILQALKLPYRVIELCTGDLGFAAMKCYDLEVWLPAAGCYREISSCSNFG 360
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_HALLT (Seryl-tRNA synthetase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 80/240 (33.33%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 1 PVGGEDC-SIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA--------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMP 687 PVG ++ ++ R+ G + P V+ H+ LG+ L+I DF+ A+V+G FY K + LE LI + L ++ + + P V S+ + G P+ Y IEG D L+ TAE+PV +H D IL LPLKY A++ F + RVHQF+K+EM F +PEES E L+ E++ L L ++ ++M T DLG +K+D+E W P Sbjct: 114 PVGADESENVERRREGFDDLREVPDNVEPHYDLGEELEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVHREQDYRDVFPPIAVNSTSMRGTGQLPKFTE-DAYRIEGTNEDAYDDDDLWLLPTAEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVRPEESHERFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDLEVWAP 352
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_DESAD (Seryl-tRNA synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 70/235 (29.79%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED + + + G F+F ++H+ L L DF+ AA+++G++F LK LE L ++ + + + G+T + P IV + G P+ ++ ++ + +I TAE+P+ +H D +LSE L + Y A + CF L R HQF K+EM F P++S E++ E++ LGLH++ + + T D+G + + +D+E W+PG +Y EIS Sbjct: 117 EDDNPVIRHWGEKPEFDFTPREHWDLAVELGGVDFERAAKLTGARFVVLKKWGARLERALTSFMVDVQTMDHGYTEVIPPYIVNRDSLFGTGQLPK-FEEDLFKLKNWEYYMIPTAEVPLTNLHRDEVLSEDDLSIAYCAPTPCFRSEAGSYGKDTKGLIRQHQFHKVEMVRFAHPDKSFEDLEKMTGHAEEILKRLGLHYRVITLCTGDMGFGSAKTYDIEVWLPGQDKYREIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BARHE (Seryl-tRNA synthetase OS=Bartonella henselae GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 75/235 (31.91%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E +++ + P+ F+F K+HF LG+ L DF+ A+ +SG++F L LE L + L V + G+T ++ P +VR V P+ A+ + +G + LI TAE+P+ + + IL S LPL++++ + CF + R HQF K+EM E+S E + ED+ L L F+T+ ++T D+G A + +D+E W+PG G Y EIS Sbjct: 119 ESDNVVLRHFSVPTTFDFTPKEHFDLGQNLKQMDFERASRLSGTRFTVLSGALARLERALGQFMLDVHVYEHGYTEVSVPLLVRDESVYGAAQLPKFADDLFRTTDG--RWLISTAEVPLTNLVNNEILEISDLPLRFSSLTPCFRSEAGSAGRDTRGMLRQHQFWKVEMVSITTAEQSLIELERMTECAEDVLKRLDLPFRTMVLSTGDMGFAARKTYDIEVWLPGQGCYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ACIBC (Seryl-tRNA synthetase OS=Acinetobacter baumannii (strain ACICU) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F +KDH LG+ + +F+ A +++GS+F LK L+ L + L + +K G+T P +V + + G P+ ++ ++G + LI TAE+PV D I+ LPLKYAA + CF L R HQF K+EM +PE S EEL E + +LGL ++ + + D+G A + +D+E W+P Y EIS Sbjct: 127 GTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQFMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPK-FEEDLFKLQGEKEYYLIPTAEVPVTNFVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQALEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ACIB5 (Seryl-tRNA synthetase OS=Acinetobacter baumannii (strain AB0057) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F +KDH LG+ + +F+ A +++GS+F LK L+ L + L + +K G+T P +V + + G P+ ++ ++G + LI TAE+PV D I+ LPLKYAA + CF L R HQF K+EM +PE S EEL E + +LGL ++ + + D+G A + +D+E W+P Y EIS Sbjct: 127 GTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQFMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPK-FEEDLFKLQGEKEYYLIPTAEVPVTNFVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQALEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ACIB3 (Seryl-tRNA synthetase OS=Acinetobacter baumannii (strain AB307-0294) GN=serS PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28 Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F +KDH LG+ + +F+ A +++GS+F LK L+ L + L + +K G+T P +V + + G P+ ++ ++G + LI TAE+PV D I+ LPLKYAA + CF L R HQF K+EM +PE S EEL E + +LGL ++ + + D+G A + +D+E W+P Y EIS Sbjct: 127 GTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQFMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPK-FEEDLFKLQGEKEYYLIPTAEVPVTNFVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQALEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_WOLPM (Seryl-tRNA synthetase OS=Wolbachia pipientis wMel GN=serS PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 69/240 (28.75%), Postives = 126/240 (52.50%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ++ S + + G F+F + H++LG+ L + DF+ AA +SGS+F LK + L LIN L V + G+T + P +V++ + G P+ ++ + + + LI T+E+ + + D I+ E LP+++ A+S CF + R HQF K+E+ ++S+ E + + E++ L L ++ + + + D+G A R +D+E W+PG +Y EIS Sbjct: 113 PIGADENSNLEVRRYGGKRQFDFVPESHYELGEKLGLMDFEQAARISGSRFTILKGQLAKLGRALINCMLEMHVNEFGYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTD--ELRLIPTSEVFLTNLVADKIMEEKELPIRFTAYSECFRKEAGSAGRDTRGMIRQHQFGKVELVSITTEDQSNDELERMTSVAEEILKKLELPYRVMLLCSGDMGFAAQRTYDIEVWLPGQNKYREIS 350 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |