FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METSB (Seryl-tRNA synthetase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=serS PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28 Identity = 73/246 (29.67%), Postives = 120/246 (48.78%), Query Frame = 1 Query: 37 TVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIG-------------------TAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 T G F+F +H++LG+ L + DF+ AA++SG++F K LE L + L + G+T + P +VR + P+ N Q ++ GA LI TAE+P+ + +SIL E LPL++ A + CF + R HQF+K+E+ PE++ + HE ++ E++ L L ++ V + T D+G + + +D+E W+PG RY EIS Sbjct: 127 TFGEKPRFSFDPAEHYELGETLGLMDFETAAKLSGARFVVNKGPLARLERALGAFMLDLHTGEHGYTEVNPPILVRDDAMFGTAQLPKFENDQFWARPGAHPLLIDMFGREEAEEMKKNRLWLIPTAEVPLTNLVRESILDEKQLPLRFTASTPCFRAEAGSAGRDTRGMIRQHQFTKVELVSITTPEQALAEHERMLSCAEEVLKRLKLPYRVVTLCTGDMGFASQKTYDIEVWLPGQDRYREIS 372
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MARMM (Seryl-tRNA synthetase OS=Maricaulis maris (strain MCS10) GN=serS PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28 Identity = 75/240 (31.25%), Postives = 120/240 (50.00%), Query Frame = 1 Query: 1 PVGGEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ ++ + G P F +DH LG++L DF AAE+SGS+F L+ LE L + L + G+ ++ P +VR V G P+ A + + D LI TAE+P+ + ++I +E+ LP++ A++ CF + R+HQF K+EM P+ESD+ E + E + L L ++ + + T D+G A R +D+E WMP Y EIS Sbjct: 114 PQGADEADNVEERRWGEPRTMAFTPRDHVDLGESLGQMDFKKAAEISGSRFVALRGGLARLERALAQFMLDLHTTEHGYEEVSPPYMVRDEAVFGTGQLPKFAEDLFRTTD--DHWLIPTAEVPLTNLARETIHAEADLPMRMTAYTPCFRSEAGSAGRDTRGMIRLHQFQKVEMVSIVTPDESDAELERMTGCAEKVLQLLELPYRVMKLCTGDMGFAARRTYDLEVWMPSQDCYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SILPO (Seryl-tRNA synthetase OS=Silicibacter pomeroyi GN=serS PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27 Identity = 71/225 (31.56%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P +F K+HF L D DF+ AA++SG++F L + L + L + + G T + P +V S ++ G P+ + EG LI T+E+ + I S ++E LP +Y A S CF + R HQF K+EM P+ SD+ + ++R E + +LG+ ++T+ + T D+G A R +D+EAW+PG Y EIS Sbjct: 129 GTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQTREG--WWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHEFN (Seryl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=serS PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27 Identity = 75/244 (30.74%), Postives = 120/244 (49.18%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ++ + + G P VF+F VKDH LG+AL+ DF A ++SGS+F ++ + L L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ D I+ E+ LP+K A + CF + R+HQF K+E+ P+ S E++ E + L L ++T+ + T D+G + + FD+E W+P Y EIS Sbjct: 112 PVGADENDNVEVRRWGTPKVFDFEVKDHIDLGEALEGLDFKNAVKISGSRFIIMRGQIARLNRALGQFMLDLHTTEHGYTETYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNYVRDMIVDETELPMKMTALTPCFRSEAGSYGRDTRGVIRLHQFDKVELVQIAHPDHSMQALEDITSHAEKVLQLLNLPYRTMVLCTGDMGFGSSKTFDIEVWLPAQNTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOPS (Seryl-tRNA synthetase OS=Rhodopseudomonas palustris (strain BisB5) GN=serS PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27 Identity = 75/242 (30.99%), Postives = 120/242 (49.59%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ----VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGR---YGEIS 714 E ++ R G + F K H LG+AL + DF+AAA++SG++F LKN LE + + L + G+T + P +V+ + P+ + Q G LI TAE+ + + +SIL E LP++ A + CF + R HQF+K+E+ PE+S HE ++ E++ LGLH++ + + T D+G + + +D+E WMPG G Y EIS Sbjct: 119 EHGNVERHHFGAKRSYTFTPKAHDDLGEALGMMDFEAAAKLSGARFVVLKNGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFRDDQFAAGAIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEKSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS 360
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PROMA (Seryl-tRNA synthetase OS=Prochlorococcus marinus GN=serS PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27 Identity = 64/214 (29.91%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 73 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K+H+++ + L + D + + ++ S+F L N LE LIN+ L +G++ + P +V ++ +E G P+ A + + D L TAE+P+ +H + ++ LP+KY A+S CF L R+HQF+K+E++ F +P++S H+ + E + L L ++ V++ + DLG A +D+E W+PG Y EIS Sbjct: 141 KEHWEIAEELGLLDTEKSVRIAKSRFVTLFNHGARLERSLINFMLDIHTSKGYSEVLPPVLVNTASLEGSGQLPKFAE-ESFKCSEDDLWLTPTAEVPLTSLHRNEVIPFEKLPIKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVEPKKSKEAHQIITADAEAILQKLELPYRVVELCSGDLGFSASCTYDLEVWLPGANSYREIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHEHH (Seryl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=serS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27 Identity = 73/244 (29.92%), Postives = 120/244 (49.18%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ++ + + G P ++F VKDH +LG+ + DF A +++GS+F +K + + L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ + D+I+ E LP+K A + CF L R HQF K+E+ +PE S EEL E + LGL ++TV + T D+G + + +D+E W+P + EIS Sbjct: 112 PIGADESENVEVRRWGTPKEYDFEVKDHVELGENIGGLDFKNAVKITGSRFIVMKGQIARMHRALAQFMLDLHTTEHGYTEAYVPLLVNEDSLMGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNLVRDTIVDEEELPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPENSMQALEELTAHAETVLQKLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPAQNTFREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PSYWF (Seryl-tRNA synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=serS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27 Identity = 82/240 (34.17%), Postives = 116/240 (48.33%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-----TQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED +RK G P F+F V++H LG+ L DF AAA+++GS+F LK + L LI + L+ +K G+T P IV S +E G P+ T + E LI TAE+P+ + L S LPLK+ A + CF L R HQF K+EM +SD E++ E + L L ++ V + T D+G A R +D+E W+P Y EIS Sbjct: 118 EDNVEVRKW-GTPRQFDFKVQEHSDLGEVLGQLDFAAAAKLTGSRFSVLKGQLAQLHRALIQFMLNTHTVKYGYTECYVPYIVNSDSLEGTGQLPKFEEDLFKLTNHTNNEAMGFYLIPTAEVPMTNLVRGERLDASELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAAQSDELLEQMTGQAEYILQQLQLPYRVVKLCTGDMGFSALRTYDIEVWVPSQDTYREIS 356
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METPB (Seryl-tRNA synthetase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=serS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27 Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 73 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 + HF+LG+A + DF+AAA++SGS+F LK LE L + L + G+T + P +VR + P+ + Q + +G LI TAE+P+ + ++IL+E LPL++ A + CF + R HQF+K+E+ PE+S HE ++ E + L L ++ + + T D+G + + +D+E W+PG Y EIS Sbjct: 139 RQHFELGEATGLMDFEAAAKLSGSRFVVLKGPLARLERALGQFMLDLHTGEHGYTEVVPPVLVRDEAMFGTAQLPKFRDDQFAAGDGF--WLIPTAEVPLTNLVRENILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHERMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOPT (Seryl-tRNA synthetase OS=Rhodopseudomonas palustris (strain TIE-1) GN=serS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 72/232 (31.03%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ----VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGR---YGEIS 714 G ++F K H+ LG+AL + DF+AAA++SG++F LK LE + + L G+T + P +V+ + P+ Q G LI TAE+ + + +SIL E LP++ A + CF + R HQF+K+E+ PE+S HE ++ E++ LGLH++ + + T D+G + + +D+E WMPG G Y EIS Sbjct: 129 GEKPSYSFTPKPHYDLGEALGMMDFEAAAKLSGARFTVLKKGLARLERAIGQFFLDVHTGDHGYTEVNPPLLVKDDAMFGTAQLPKFREDQFAAGAIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEQSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS 360 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |