FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEP3 (Seryl-tRNA synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=serS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.348e-37 Identity = 87/240 (36.25%), Postives = 133/240 (55.42%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G D + + G P F+F K H+++G+ LDI DF+AAA V+GS+F + K LE LIN+ L + K G+T + P +V + G P+ + + G D LI TAE+PV ++ D+I+ LP+ + A+S CF L R HQF+K+E+ F +P++S E++ R E++ +LGL ++ V + T DLG A +K+D+E WMP GRY EIS Sbjct: 112 PIGDSDEDNVEIRRWGEPRKFDFEPKPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMPSYGRYVEIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BDEBA (Seryl-tRNA synthetase OS=Bdellovibrio bacteriovorus GN=serS PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.459e-37 Identity = 83/228 (36.40%), Postives = 128/228 (56.14%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K VG P+ F+F K+H++LG+AL+I DF+ A + +G++F +LK A +E LI + + + +K G+T + P +V S+ + G P+ V+ +EG+D LI TAE+PV + + IL E LP + A+S CF L R HQF K+E+ VF P++S HE L E + L L F+ V + T D+G + + +D+E W+PG Y EIS Sbjct: 132 KVVGTPTQFSFKAKEHWELGEALNIIDFERAGKTTGTRFAFLKGAAAQMERALIQFMMDKHSMKHGYTEMIPPFMVNSNSLLGTGNFPK-FKEDVFHLEGSDLYLIPTAEVPVTNYYNNEILDEKDLPQSFCAYSPCFRSEAGSAGRDTKGLIRQHQFDKVELMVFAHPDKSHEVHEALTSHAEQILMDLELPFRRVLLCTGDMGFGSAKTYDLEVWLPGQNAYREIS 358
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ROSCS (Seryl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=serS PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37 Identity = 84/234 (35.90%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E +++ G P F+F K H++LG+ALDI DF+ ++SGS+FY LK L+ LI W L I++G+ + TP +V+ + P+ + +E D L+ TAE+PV +H D IL LPL+Y A++ CF + R HQF K+EM++F P+ S E+L E LGL F+T ++ T DLG A R +D+E W PG G + E+S Sbjct: 117 ETYNVVIAQEGEPRAFDFAPKPHWELGEALDIIDFERGVKLSGSRFYVLKGLGARLQRALIQWMLDLHIQQGYHEVYTPFVVKEQCMWGARQLPKFRDNLYRDVED-DLWLVPTAEVPVTNLHRDEILEADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVHPDTSYDELEKLRADAEATCRLLGLTFRTKELCTGDLGFAATRTYDIEVWAPGQGEWLEVS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_DESPS (Seryl-tRNA synthetase OS=Desulfotalea psychrophila GN=serS PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37 Identity = 89/240 (37.08%), Postives = 129/240 (53.75%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTV-GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG D I V G F F K H++LG+ D DF+ AA++SG++F LK A L+ L N+ L K G+T + P +V S+ + G P+ +++I+ D LI TAE+PV IH D ++E LP+KY AF+ CF L R HQF+K+E+ F PE S E L+ E++ LGLH++ V + T DLG + + +D+E W+PG +Y EIS Sbjct: 117 PVGNSDEENIELRVWGKKPEFTFTPKAHYELGEEADTIDFERAAKISGARFAILKGFASRLDRALTNFMLDLHTQKHGYTEVLPPFLVNSASLTATGQLPK-FKEDLFAIKDWDLYLIPTAEVPVTNIHRDETIAEQDLPIKYTAFTPCFRSEAGSHGRDTRGLVRQHQFNKVELVKFTTPERSTDELESLLGDAEEVLQLLGLHYRVVKLCTGDLGFSSSKTYDIEVWLPGQQKYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEVO (Seryl-tRNA synthetase OS=Thermoplasma volcanium GN=serS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 78/223 (34.98%), Postives = 129/223 (57.85%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 G+ V + K H LG+ L I D ++AA++SG++FY++KN + LEM L N+ + + +RGFT + P ++ + +T +Y IE D LI T+E + + + L E LP++ A S CF ++RVHQF+K+E F+FC+PE+S Y EE++ E++Y SLG+ ++ V++ + +LG A +K+D+EAW P G++ EI Sbjct: 148 GDYEVIDERPKSHVDLGQELGIIDLESAAKISGARFYFIKNRLLKLEMALENYAVDFLSQRGFTVVEPPYMLNLESMRGATDLETFKDT-LYKIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGIFRVHQFNKIEQFIFCKPEDSWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAKKYDIEAWFPAQGKFREI 369
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THETN (Seryl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=serS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 85/240 (35.42%), Postives = 132/240 (55.00%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G D + + G P F+F K H+++G+AL I DF+AA+ V+GS+F + K LE LIN+ L + K G+ + P +V + G P+ + +EG D LI TAE+PV ++ ++I+ LP+ + A+S CF L R HQF K+E+ F +P++S E++ R E++ +LGL ++ V + T DLG A +K+D+E WMP GRY EIS Sbjct: 112 PIGESDEDNVEVRRWGEPRKFDFEPKPHWEIGEALGILDFEAASRVTGSRFVFYKGLGARLERALINFMLDLHIEKHGYKEVFPPFLVHRRSMFGTGQLPK-FEEDAFKVEGTDYFLIPTAEVPVTNLYRETIIDGEQLPIYHCAYSACFRQEAGAAGRDTRGLIRQHQFDKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_STAMF (Seryl-tRNA synthetase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=serS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 84/215 (39.07%), Postives = 121/215 (56.28%), Query Frame = 1 Query: 67 PVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 PV L K L + D A +V+GS+FYYL N+ V L+M L+ + + + +G+T + P ++R V+ +Y IEG D LI TAE P+ +H + E LPLKY S CF ++RVHQF K+E FV+ +PE+S EELI E L+ LG+ ++ V++A+ DLGAPA +K+D+EAWMP GRY E+ Sbjct: 160 PVGHADMLEKVLRLGDTFKAGQVAGSRFYYLFNDIVFLDMALLAYAIDYLTSKGYTLVLPPYMLRHKVMMGV-IDMDTFKDAIYKIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAGNRDLKGIFRVHQFHKVEQFVYAKPEDSWDIMEELISNAEHLFRGLGIPYRIVNIASGDLGAPAAKKYDLEAWMPAQGRYREM 373
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BREBN (Seryl-tRNA synthetase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=serS PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 88/240 (36.67%), Postives = 129/240 (53.75%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ED ++I T G P F+F +K H++L I DF+ AA+V+GS+F + K LE L+N+ + + G+ + P IV + + G P+ + IEG D LI TAE+PV +H D I+ + LP Y AFS CF L R HQF+K+E+ F +PEES ++L++ E + LGL ++ + M T DLG A +KFD+E W+P Y EIS Sbjct: 113 PIGTTEDDNVIAWTWGEPRAFDFEIKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLERALMNFMMDLHSNEHGYEEVIPPFIVNRTSMTGTGQLPK-FEEDAFKIEGPDYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYDELDKLVKNAEKVLQLLGLPYRVLSMCTGDLGFTAAKKFDIEVWIPSGDTYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEAC (Seryl-tRNA synthetase OS=Thermoplasma acidophilum GN=serS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 82/236 (34.75%), Postives = 132/236 (55.93%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPS---VFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 +D +K GN V + K H LG L++ D ++AA +SGS+FY++KN + LEM L N+ + + +RGF+ + P ++ + +T +Y IEG D LI T+E + + + L E LPL+ A S CF ++RVHQF+K+E FVFC+PE+S + EE++ E +Y SLG+ ++ V++ + +LG A +K+D+EAW P G++ EI Sbjct: 135 DDIEEFKKNSGNSQDYEVLDERPKSHVDLGLDLNVIDLESAARISGSRFYFIKNRLLKLEMALENYAVDFLSQRGFSIVEPPYMLNLESMRGATDLETFKDT-LYKIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKDTKGIFRVHQFNKIEQFVFCKPEDSWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELGRLAAKKYDIEAWFPAQGKFREI 369
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CAMJE (Seryl-tRNA synthetase OS=Campylobacter jejuni GN=serS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 85/239 (35.56%), Postives = 129/239 (53.97%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E+ ++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+ + RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++ IL+ LP+K +S CF + R HQF K+E+ +PE+SDS E++ DL SSLGL + + + T DLG A + D+E W+PG +Y EIS Sbjct: 109 PVGEDENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREIS 346 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |