FC920647

Overview
NameFC920647
Unique NameFC920647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig26 contig Ccv1_Contig26:799..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_ERWT9 (60 kDa chaperonin OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=groL PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 136/238 (57.14%), Postives = 181/238 (76.05%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+EEG   ++ L VVEGMQFDRGY+SPYF+   E  AVE E+  +LL DKKI+N R+L+ VLE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGGTVI +E+G+ L+K G E +G A +VV++KDTTTI+     + A+S RV QIR  IE+A  DY+REKL ER+AKL+GGVAV++VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIRELLPVLEAVAKAGKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGMELEKAGLEDMGQAKRVVISKDTTTIIDGTGEEVAISGRVTQIRQQIEDATSDYDREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+E+G   EN L VVEGMQFDRGY+SPYF+ + + M+ E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_COXBN (60 kDa chaperonin OS=Coxiella burnetii (strain Dugway 5J108-111) GN=groL PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+E+G   EN L VVEGMQFDRGY+SPYF+ + + M+ E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_COXB2 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuG_Q212) GN=groL PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+E+G   EN L VVEGMQFDRGY+SPYF+ + + M+ E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_COXB1 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuK_Q154) GN=groL PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+E+G   EN L VVEGMQFDRGY+SPYF+ + + M+ E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_CAMC5 (60 kDa chaperonin OS=Campylobacter curvus (strain 525.92) GN=groL PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71
Identity = 141/238 (59.24%), Postives = 176/238 (73.95%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711
            AM KVG+ GV+T+EE KS E+ L VVEGMQFDRGY+SPYF+T++EKM VE  N  +LL DKKITN +DL+ VLE   +   P+LI+AEDIE EALATLVVNKLRG L I+A+KAPGFG+R+   L+DIAILTGG VI +E+G  L+    E LG AS VV+ KD TTIV     + A+  R+ QI+  I     DY++EKL ER+AKLSGGVAVI+VGA TETE+K + +   DAL+A
Sbjct:  164 AMEKVGKDGVITVEEAKSIEDELNVVEGMQFDRGYLSPYFITNAEKMQVELSNPFILLFDKKITNLKDLLPVLEQIQKTGKPLLIVAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESATLEDLGQASSVVIDKDNTTIVNGAGEKSAIDARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSA 401          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEHT (60 kDa chaperonin OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=groL PE=3 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.534e-71
Identity = 138/239 (57.74%), Postives = 181/239 (75.73%), Query Frame = 1
Query:    1 AMSKVGR-TGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711
            AM KVGR +GV+T+EEG+S EN L VVEGMQFDRGY+SPYF+   EK  VE +N  +LLVDKKI+N R+L+  LE   + + P+LIIAED+E EALATLVVN +RG +K++A+KAPGFG+R+   L DIA+LTGGTVI +E+GL L+K   E LG A +V++TKD TTI+     +  ++ RV+QI+  IE A  DY++EKL ER+AKL+GGVAVI+VGA TE E+K + +   DALNA
Sbjct:  165 AMEKVGRNSGVITVEEGQSLENELDVVEGMQFDRGYLSPYFINSPEKGTVELDNPFILLVDKKISNIRELLPTLEAVAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGLELEKATVEDLGTAKRVIITKDDTTIIDGAGEEAGINGRVSQIKAQIEEATSDYDKEKLQERMAKLAGGVAVIKVGAATEMEMKEKKDRVEDALNA 403          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_COXBR (60 kDa chaperonin OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=groL PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.534e-71
Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+E+G   EN L VVEGMQFDRGY+SPYF+ + + M+ E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENIAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_CELJU (60 kDa chaperonin OS=Cellvibrio japonicus (strain Ueda107) GN=groL PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.534e-71
Identity = 135/238 (56.72%), Postives = 177/238 (74.37%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM KVG+ GV+T+EEG S +N L VVEGMQFDRGY+SPYF+ + + M+VE++N  +LLVDKKI+N R+L+ VLE   +   P++I+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGGTVI +EVGL L+    E LG A +V + KD TTIV      + +  RV QIR  IE    DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++   DAL+A
Sbjct:  165 AMEKVGKEGVITVEEGTSLDNELDVVEGMQFDRGYLSPYFINNQDNMSVEHDNPFILLVDKKISNIRELLPVLEGVAKSGKPLVIVAEDVEGEALATLVVNNIRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEVGLDLESATLEHLGTAKRVTMNKDNTTIVDGAGKAEEIKTRVQQIRVQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402          
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.534e-71
Identity = 140/238 (58.82%), Postives = 174/238 (73.11%), Query Frame = 1
Query:    1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711
            AM+KVG+ GV+T+EE KS +  + +VEGMQFDRGYISPYFVTD E+M V+  N  LLL DKKIT+ +DLI  LE   R   P++IIAED+E EALATLVVNKLRG L + A+KAP FGER+   L DIAILTGG VI +EVGL L+ V   +LG AS V +TKDTT +V +   +  + KRV Q++  +   + +Y++EKL ERIAKL GGVAVI+VGA TETELK R+    DALNA
Sbjct:  163 AMAKVGKDGVITIEESKSLQTEMEIVEGMQFDRGYISPYFVTDPERMIVQLNNAYLLLTDKKITSIQDLIPTLERVARSGRPLVIIAEDVEGEALATLVVNKLRGVLNVVAVKAPAFGERRKAMLQDIAILTGGQVISEEVGLTLEDVELTMLGEASSVTVTKDTTILVSEKGNKADIQKRVEQLKQQLAETDSEYDKEKLQERIAKLVGGVAVIKVGAATETELKDRKLRLEDALNA 400          
The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ERWT95.769e-7157.1460 kDa chaperonin OS=Erwinia tasmaniensis (strain ... [more]
CH60_COXBU5.769e-7156.7260 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]
CH60_COXBN5.769e-7156.7260 kDa chaperonin OS=Coxiella burnetii (strain Dug... [more]
CH60_COXB25.769e-7156.7260 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_COXB15.769e-7156.7260 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_CAMC55.769e-7159.2460 kDa chaperonin OS=Campylobacter curvus (strain ... [more]
CH60_PSEHT7.534e-7157.7460 kDa chaperonin OS=Pseudoalteromonas haloplankti... [more]
CH60_COXBR7.534e-7156.7260 kDa chaperonin OS=Coxiella burnetii (strain RSA... [more]
CH60_CELJU7.534e-7156.7260 kDa chaperonin OS=Cellvibrio japonicus (strain ... [more]
CH602_THEVL7.534e-7158.8260 kDa chaperonin 2 OS=Thermosynechococcus vulcanu... [more]

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Properties
Property NameValue
Genbank descriptionC32011C02EF RVDevelop1 Citrus clementina cDNA clone C32011C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bp
GCCATGAGTAAAGTGGGACGTACGGGTGTGGTGACCCTTGAAGAGGGAAA
AAGTGCTGAGAATATGCTCTATGTTGTTGAGGGAATGCAATTTGATCGTG
GTTATATTTCTCCCTACTTCGTCACTGATAGTGAGAAAATGGCAGTTGAA
TATGAGAACTGCAAGTTGCTTCTTGTGGATAAAAAGATTACCAATGCAAG
GGACCTTATCAACGTTTTGGAAGATGCGATTAGAGGTGCATACCCAATTT
TGATTATTGCAGAAGATATTGAGCAAGAAGCACTGGCAACTCTTGTCGTG
AACAAGCTGAGAGGTGCATTGAAGATTGCTGCTCTTAAAGCTCCTGGTTT
TGGAGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATTTTGACTGGAG
GAACTGTAATCAGAGATGAGGTGGGACTTGCCTTGGACAAAGTTGGCAAG
GAGGTCCTAGGTAATGCTTCTAAAGTTGTGCTCACAAAGGATACCACCAC
CATTGTGGGGGATGGCAGCACCCAGGATGCAGTGAGCAAACGAGTGGCGC
AAATCAGAACTCTAATTGAGAACGCTGAGCAAGACTATGAAAGGGAGAAG
CTTAATGAAAGAATTGCTAAACTGTCAGGTGGTGTTGCTGTCATACAGGT
TGGAGCTCAAACTGAGACAGAGCTTAAGAGAAGAAGTGAGAGTCGAGATG
CTCTTAATGCACAAGCTG
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