FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_RHOFD (60 kDa chaperonin 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groL1 PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 8.620e-67 Identity = 130/238 (54.62%), Postives = 174/238 (73.11%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+E+GKS ++ L VVEGMQFDRGY+SPYF+ + EK A +N +LL DKKI+N RDL+ LE + P+LII+ED+E EALATLVVN +RG LK+ A+KAPGFG+R+ L+DIAILTGG VI +EVG++L+KV LG+A ++ + K+ T I+ + RV Q+R IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEDGKSLDSELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLYDKKISNIRDLLPTLEQVAKSGRPLLIISEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGMSLEKVTLADLGSAKRIEVGKENTIIIDGAGAAADIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 8.620e-67 Identity = 129/238 (54.20%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE KS E + +VEGM+FDRGY+SPYFVT++EKM E ++ +LL +KK++ + ++ VLE ++ P+LIIAED+E EALATLVVN+LRG LK+AA+KAPGFG+R+ L+DIAILTGG +I D++G+ L+ V ++LG A KVV+ K+ TTIV + + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DALNA Sbjct: 165 AMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTAELDDVYVLLHEKKLSGLQAMLPVLEAVVQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISDDLGMKLENVTIKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_BRAJA (60 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groL1 PE=2 SV=3) HSP 1 Score: 253.447 bits (646), Expect = 8.620e-67 Identity = 125/233 (53.65%), Postives = 172/233 (73.82%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSESRD 699 AM KVG GV+T+EE KS + L VVEGMQFDRGY SPYFVT++EKM VE+E+ +L+ +KK++ + ++ +LE ++ P+L++AED+E EALATLVVN+LRG LK+AA+KAPGFG+R+ L+DIAILTGG I +++G+ L+ V ++LG A KVV+ K+ TTIV ++ + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K R + D Sbjct: 165 AMQKVGNDGVITVEEAKSLDTELEVVEGMQFDRGYASPYFVTNAEKMRVEFEDPYILIHEKKLSTLQSMLPLLEAVVQSGKPLLVVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQAISEDLGIKLENVTLKMLGRAKKVVIDKENTTIVNGAGSKKDIEARVTQIKMQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVD 397
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_VEREI (60 kDa chaperonin OS=Verminephrobacter eiseniae (strain EF01-2) GN=groL PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66 Identity = 130/238 (54.62%), Postives = 172/238 (72.27%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+E+GKS E+ L VVEGMQFDRGY+SPYF+ + +K A +N +LL DKKI+N RDL+ LE + P+L+IAE++E EALATLVVN +RG LK+ A+KAPGFG+R+ L+DIAILTGG VI +EVGL L+KV LG A ++ + K+ T I+ + RV Q+R IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEDGKSLESELDVVEGMQFDRGYLSPYFINNPDKQAALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLVIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRIEVGKENTIIIDGAGAAGDIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_STRCV (60 kDa chaperonin OS=Streptococcus constellatus GN=groL PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66 Identity = 129/238 (54.20%), Postives = 176/238 (73.95%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKR-RSESRDALNA 711 AM KVG GV+T+EE K E L VVEGMQFDRGY+S Y VTD+EKM + +N +L+ DKKI+N ++++ +LE+ ++ + P+LIIA+D++ EAL TLV+NK+RG + A+KAPGFG+R+ L+DIAILTGGTVI +++GL L E LG ASKV + KD+T IV +A++ RVA I++ IE+A ++++EKL ER+AKLSGGVAVI+VGA TETELK + DALNA Sbjct: 163 AMEKVGNDGVITIEESKGMETELDVVEGMQFDRGYLSQYMVTDNEKMVADLDNPYILITDKKISNIQEILPLLENILKTSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQASKVTVDKDSTVIVEGSGAAEAIANRVAVIKSQIESATSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNA 400
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_LEGPC (60 kDa chaperonin OS=Legionella pneumophila (strain Corby) GN=groL PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66 Identity = 126/238 (52.94%), Postives = 176/238 (73.95%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+E+G EN L VVEGMQFDRGYISPYF+ + + M+ E E+ +LLVDKK+++ R++++VLE + P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+ L DIAILT G VI +E+G +L+ E LG+A ++V+TK+ TT++ ++ R+AQIR +E DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 164 AMEKVGKEGVITVEDGNGLENELSVVEGMQFDRGYISPYFINNQQNMSCELEHPFILLVDKKVSSIREMLSVLEGVAKSGRPLLIIAEDVEGEALATLVVNNMRGIVKVCAVKAPGFGDRRKAMLQDIAILTKGQVISEEIGKSLEGATLEDLGSAKRIVVTKENTTVIDGEGKATEINARIAQIRAQMEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_GRABC (60 kDa chaperonin OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=groL PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.126e-66 Identity = 130/238 (54.62%), Postives = 172/238 (72.27%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K + L VVEGMQFDRGY+SPYF+T+ EKM E +N +L+ +KK+ + L+ +LE ++ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGTVI +++G+ L+ V + LG A +V++ K+ TTIV + D + R +QIR E DY+REKL ER+AKL+GGVAVI+VG TE E+K R + DAL+A Sbjct: 165 AMQKVGNEGVITVEEAKGIQTELDVVEGMQFDRGYVSPYFITNPEKMIAELDNPYILIHEKKLAQLQPLLPLLESVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLETVTLQQLGTAKRVLIEKENTTIVEGAGSPDDIKGRCSQIRAQAEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_STRM5 (60 kDa chaperonin OS=Stenotrophomonas maltophilia (strain R551-3) GN=groL PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.470e-66 Identity = 127/238 (53.36%), Postives = 177/238 (74.37%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM +VG+ GV+T+EEG +N L VV+GMQFDRGY+SPYF+ + + + ++ +LL DKKI+N RDL+ VLE + P+LI+AE++E EALATLVVN +RG +K+ A+KAPGFG+R+ L+D+A+LTGGTVI +EVGL+L+K + LG A KV ++K+ TTI+ + AV RVAQI+T I++ DY+REKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTVISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDSRVAQIKTQIQDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_STRGC (60 kDa chaperonin OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=groL PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.470e-66 Identity = 130/238 (54.62%), Postives = 174/238 (73.11%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKR-RSESRDALNA 711 AM KVG GV+T+EE K E L VVEGMQFDRGY+S Y VTDSEKM + +N +L+ DKKI+N ++++ +LE ++ P+LIIA+D++ EAL TLV+NK+RG + A+KAPGFG+R+ L+DIAILTGGTVI +++GL L E LG ASKV + KD+T IV +A++ RVA I++ IE+A ++++EKL ER+AKLSGGVAVI+VGA TETELK + DALNA Sbjct: 163 AMEKVGNDGVITIEESKGMETELDVVEGMQFDRGYLSQYMVTDSEKMVADLDNPYILITDKKISNIQEILPLLESILKTNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQASKVTVDKDSTVIVEGAGNPEAIANRVAVIKSQIESATSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNA 400
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_METI4 (60 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groL PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.470e-66 Identity = 128/238 (53.78%), Postives = 174/238 (73.11%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 A+ KVG+ G VT+EE K E L VVEGMQFDRGYISPYFVT++E++ EN +L+ +KKI+N +DL+ +LE + P+LIIAED+E EALATLVVNKLRG L++ A+KAPGFG+R+ L+DIAILTGG + +++G+ L+ V E LG A ++++ K+ TTI+ ++ + R+ QIR IE DY+REKL ER+AKL+GGVAVI VGA TETELK +++ DAL+A Sbjct: 165 ALDKVGKDGTVTVEEAKHIETTLEVVEGMQFDRGYISPYFVTNAEELEAVLENAYILIHEKKISNLKDLLPLLEKIAKAGRPLLIIAEDVEGEALATLVVNKLRGTLQVCAVKAPGFGDRRKAMLEDIAILTGGRCLTEDLGIKLENVQLEDLGRAKRIIVEKENTTIIEGSGSRSEIQGRINQIRRQIEETTSDYDREKLQERLAKLAGGVAVIHVGAATETELKEKKARVEDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |