FC920652 | Citrus Genome Database

Overview


Name	FC920652
Unique Name	FC920652
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	712

Libraries


Library Name	Type
RVDevelop1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_DROME (Enolase OS=Drosophila melanogaster GN=Eno PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.283e-62
Identity = 123/185 (66.49%), Postives = 146/185 (78.92%), Query Frame = 2

Query:   83 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCF 628
            +TI A+KARQI+DSRGNPTVEVD+TT  G + RAAVPSGASTG++EALELRD   ++Y GK V KAV +VN  +GP L  A  D  +Q +IDN+M++ LDGT N     K K GANAIL VSLA+ KAGA  K +PLYKHIA+L+GNK ++LPVPAFNVINGGSHAGNKLAMQEFMILP GA+ F
Sbjct:   68 MTIKAIKARQIYDSRGNPTVEVDLTTELG-LFRAAVPSGASTGVHEALELRDNDKANYHGKSVLKAVGHVNDTLGPELIKANLDVVDQASIDNFMIK-LDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHIADLAGNKEIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSF 245

HSP 2 Score: 37.3502 bits (85), Expect = 1.283e-62
Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F EAMKMG EVYHHLK VIK
Sbjct:  245 FTEAMKMGSEVYHHLKNVIK 264

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOB_RABIT (Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1 SV=4)

HSP 1 Score: 223.787 bits (569), Expect = 2.183e-62
Identity = 123/180 (68.33%), Postives = 142/180 (78.89%), Query Frame = 2

Query:  104 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNHDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 36.965 bits (84), Expect = 2.183e-62
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F+EAM++G EVYHHLK VIK
Sbjct:  178 FREAMRIGAEVYHHLKGVIK 197

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOB_PIG (Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.183e-62
Identity = 123/180 (68.33%), Postives = 142/180 (78.89%), Query Frame = 2

Query:  104 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 36.965 bits (84), Expect = 2.183e-62
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F+EAM++G EVYHHLK VIK
Sbjct:  178 FREAMRIGAEVYHHLKGVIK 197

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOB_MOUSE (Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 223.787 bits (569), Expect = 2.183e-62
Identity = 123/180 (68.33%), Postives = 142/180 (78.89%), Query Frame = 2

Query:  104 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  + YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FK+
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKARYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180

HSP 2 Score: 36.965 bits (84), Expect = 2.183e-62
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F+EAM++G EVYHHLK VIK
Sbjct:  178 FKEAMRIGAEVYHHLKGVIK 197

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOB_BOVIN (Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.711e-62
Identity = 122/180 (67.78%), Postives = 141/180 (78.33%), Query Frame = 2

Query:  104 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPELILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 36.965 bits (84), Expect = 3.711e-62
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F+EAM++G EVYHHLK VIK
Sbjct:  178 FREAMRIGAEVYHHLKGVIK 197

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 6.310e-62
Identity = 124/187 (66.31%), Postives = 146/187 (78.07%), Query Frame = 2

Query:   83 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            ++I  V AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F++
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 33.8834 bits (76), Expect = 6.310e-62
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F+EAM++G EVYH+LK VIK+
Sbjct:  178 FREAMRIGAEVYHNLKNVIKE 198

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_PLAYO (Enolase OS=Plasmodium yoelii yoelii GN=ENO PE=3 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 8.226e-62
Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 2

Query:  113 IFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSG--NKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKKP*RW 646
            IF SRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD   S YLGKGV +A+ N+N II P L G D  EQ  IDN MVQ+LDG+  EWGW K KLGANAILA+S+AIC+AGA   K  LYK++A+L+G   + ++LPVP  NVINGGSHAGNKL+ QEFMI+PVGA  FK+  R+
Sbjct:   11 IFYSRGNPTVEVDLETTLG-IFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQQAIKNINEIIAPKLIGLDCREQKKIDNMMVQELDGSKTEWGWSKSKLGANAILAISMAICRAGAAANKTSLYKYVAQLAGKNTEKMILPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEAMRY 190

HSP 2 Score: 32.3426 bits (72), Expect = 8.226e-62
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F+EAM+ G EVYH LK+ IKK
Sbjct:  184 FKEAMRYGAEVYHTLKSEIKK 204

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 8.228e-62
Identity = 123/187 (65.78%), Postives = 146/187 (78.07%), Query Frame = 2

Query:   83 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F++
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 33.8834 bits (76), Expect = 8.228e-62
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F+EAM++G EVYH+LK VIK+
Sbjct:  178 FREAMRIGAEVYHNLKNVIKE 198

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOA_HUMAN (Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 8.228e-62
Identity = 123/187 (65.78%), Postives = 146/187 (78.07%), Query Frame = 2

Query:   83 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F++
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 33.8834 bits (76), Expect = 8.228e-62
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F+EAM++G EVYH+LK VIK+
Sbjct:  178 FREAMRIGAEVYHNLKNVIKE 198

[Close]

BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENOA_CHICK (Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 2.378e-61
Identity = 124/187 (66.31%), Postives = 144/187 (77.01%), Query Frame = 2

Query:   83 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     YLGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  FK+
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADTFKE 180

HSP 2 Score: 33.8834 bits (76), Expect = 2.378e-61
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1

Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F+EAM++G EVYH+LK VIK+
Sbjct:  178 FKEAMRIGAEVYHNLKNVIKE 198

The following BLAST results are available for this feature:

BLAST of FC920652 vs. ExPASy Swiss-Prot

BLAST of FC920652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_DROME	1.283e-62	66.49	Enolase OS=Drosophila melanogaster GN=Eno PE=1 SV=...	[more]
ENOB_RABIT	2.183e-62	68.33	Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1...	[more]
ENOB_PIG	2.183e-62	68.33	Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1	[more]
ENOB_MOUSE	2.183e-62	68.33	Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3	[more]
ENOB_BOVIN	3.711e-62	67.78	Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1	[more]
ENOA_MACFA	6.310e-62	66.31	Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ...	[more]
ENO_PLAYO	8.226e-62	65.19	Enolase OS=Plasmodium yoelii yoelii GN=ENO PE=3 SV...	[more]
ENOA_PONAB	8.228e-62	65.78	Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1	[more]
ENOA_HUMAN	8.228e-62	65.78	Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2	[more]
ENOA_CHICK	2.378e-61	66.31	Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2	[more]

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Properties


Property Name	Value
Genbank description	C32011C09EF RVDevelop1 Citrus clementina cDNA clone C32011C09, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC920652 ID=FC920652; Name=FC920652; organism=Citrus clementina; type=EST; length=712bp
GAGAACAAGACTCTTCTCGTTCCACAGACTCTCTCTCTCGTTCTAGATCT
TTCTTCGGTTTTCCAGCTTTCAGAAAATGGCCATAACCATCACTGCCGTC
AAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGA
CGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTG
CATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGAT
TACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCAT
TGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACA
ACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGC
AAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTATCTG
CAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCG
AACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTC
ATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTAT
GATTCTTCCTGTAGGAGCTTCCTGTTTCAAGAAGCCATGAAGATGGGTGT
AGAAGTATATCACCATCTGAAGGCTGTGATTAAAAAGAATACGGCCAGGA
TGCTACAATGTT