FC920652

Overview
NameFC920652
Unique NameFC920652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920652_ssr29 microsatellite FC920652_ssr29:29..38. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:7..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_THEON (Enolase OS=Thermococcus onnurineus (strain NA1) GN=eno PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.018e-49
Identity = 113/187 (60.43%), Postives = 130/187 (69.52%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKKP*RWV 649
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLA+ KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA  F++  RWV
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVTWQRDIDTLML-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSFREAIRWV 183          

HSP 2 Score: 22.3274 bits (46), Expect = 1.018e-49
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVI 681
            F+EA++   E YH LK VI
Sbjct:  176 FREAIRWVSETYHVLKKVI 194          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_PSEPK (Enolase OS=Pseudomonas putida (strain KT2440) GN=eno PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.327e-49
Identity = 103/182 (56.59%), Postives = 123/182 (67.58%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCF 628
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDPSDQKALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTF 179          

HSP 2 Score: 33.113 bits (74), Expect = 1.327e-49
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F + ++MG E++HHLKAV+K
Sbjct:  179 FSDGLRMGTEIFHHLKAVLK 198          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_PSEPG (Enolase OS=Pseudomonas putida (strain GB-1) GN=eno PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.327e-49
Identity = 103/182 (56.59%), Postives = 123/182 (67.58%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCF 628
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRELLLGKDPSDQKALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTF 179          

HSP 2 Score: 33.113 bits (74), Expect = 1.327e-49
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F + ++MG E++HHLKAV+K
Sbjct:  179 FSDGLRMGTEIFHHLKAVLK 198          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO1_PSESM (Enolase 1 OS=Pseudomonas syringae pv. tomato GN=eno1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.327e-49
Identity = 103/188 (54.79%), Postives = 124/188 (65.96%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKKP*RW 646
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S Y+GKGV KAV+N+N  I   L GKDP +Q A+D+ M+  LD T N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFMI PVGA  F +  RW
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYMGKGVLKAVANINGPIRDLLLGKDPVDQKALDHAMI-ALDATEN-----KASLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNIDIQEFMIQPVGAKSFAEALRW 185          

HSP 2 Score: 33.113 bits (74), Expect = 1.327e-49
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F EA++ G E++HHLKAV+K
Sbjct:  179 FAEALRWGTEIFHHLKAVLK 198          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_CLAHE (Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.730e-49
Identity = 106/184 (57.61%), Postives = 133/184 (72.28%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCF 628
            I+ + +R ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S + GKGV+KAV+NVN II PAL  +  D  +Q A+D ++  +LDGT N     K K+GANAIL VS+A+ KA A  K++PLY HI++LSG K   VLPVP  NV+NGGSHAG +LA QEFMI+P GA  F
Sbjct:    3 ISKIHSRYVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGSHEACELRDGDKSKWAGKGVTKAVANVNEIIAPALIKENLDVKDQAAVDAFL-NKLDGTTN-----KTKIGANAILGVSMAVAKAAAAEKRVPLYAHISDLSGTKKPFVLPVPFMNVVNGGSHAGGRLAFQEFMIVPSGAPSF 179          

HSP 2 Score: 28.4906 bits (62), Expect = 1.730e-49
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F EAM+ G EVY  LK++ KK
Sbjct:  179 FTEAMRQGAEVYQKLKSLTKK 199          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_PYRKO (Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.730e-49
Identity = 112/187 (59.89%), Postives = 130/187 (69.52%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKKP*RWV 649
            IT V AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGGS Y GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLA+ KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA  F++  RWV
Sbjct:    7 ITNVIAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGSRYHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDTLML-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSFREAIRWV 183          

HSP 2 Score: 23.483 bits (49), Expect = 1.730e-49
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIKKNTAR 699
            F+EA++   E YH LK VI +   R
Sbjct:  176 FREAIRWVSETYHVLKKVIMEKYGR 200          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_BACHD (Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.730e-49
Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            IT V AR++ DSRGNPTVEV+V    G + RA VPSGASTG YEA+ELRDGG  +LGKGV KAV NVN +I P L G D  +Q  ID +M+ +LDGT N     K KLGANAIL VS+A+ +A A+   +PLY ++   +  +   LPVP  N+INGG HA N + +QEFMI+PVGA  FK+
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVYLESGAMGRALVPSGASTGEYEAVELRDGGERFLGKGVLKAVENVNEVIAPELIGFDALDQIGIDQHMI-ELDGTEN-----KGKLGANAILGVSMAVARAAANALDLPLYVYLGGFNAKQ---LPVPMMNIINGGEHADNNVDIQEFMIMPVGAESFKE 176          

HSP 2 Score: 28.8758 bits (63), Expect = 1.730e-49
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIKK---NTA 696
            F+EA++ G E++H LK V+K    NTA
Sbjct:  174 FKEALRTGTEIFHSLKKVLKSKGYNTA 200          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_BACLD (Enolase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=eno PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.730e-49
Identity = 104/183 (56.83%), Postives = 127/183 (69.40%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ +ID  ++ +LDGT N     K KLGANAIL VS+A+ +A A   +IPLY++   L G  +  LPVP  N++NGG HA N + +QEFMI+PVGA  F++
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTESGAFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELIGFDVTEQVSIDKLLI-ELDGTEN-----KGKLGANAILGVSMAVARAAADFLQIPLYQY---LGGFNSKTLPVPMMNIVNGGEHADNNVDIQEFMIMPVGAENFRE 177          

HSP 2 Score: 31.187 bits (69), Expect = 1.730e-49
Identity = 13/27 (48.15%), Postives = 22/27 (81.48%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIKK---NTA 696
            F+EA++MG +++H LK+V+K+   NTA
Sbjct:  175 FREALRMGAQIFHSLKSVLKEKGLNTA 201          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO1_CANAL (Enolase 1 OS=Candida albicans GN=ENO1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.255e-49
Identity = 111/186 (59.68%), Postives = 128/186 (68.82%), Query Frame = 2
Query:   92 TAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            T + AR ++DSRGNPTVEVD TT  G + R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN II PAL  A  D  +Q  ID +++  LDGT N     K KLGANAIL VSLA   A A  + IPLYKHIA +S  K    VLPVP  NV+NGGSHAG  LA QEFMI P G S F +
Sbjct:    5 TKIHARYVYDSRGNPTVEVDFTTDKG-LFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDIIAPALIKAKIDVVDQAKIDEFLLS-LDGTPN-----KSKLGANAILGVSLAAANAAAAAQGIPLYKHIANISNAKKGKFVLPVPFQNVLNGGSHAGGALAFQEFMIAPTGVSTFSE 183          

HSP 2 Score: 31.187 bits (69), Expect = 2.255e-49
Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIKK 687
            F EA+++G EVYH+LK++ KK
Sbjct:  181 FSEALRIGSEVYHNLKSLTKK 201          
BLAST of FC920652 vs. ExPASy Swiss-Prot
Match: ENO_PSEF5 (Enolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=eno PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.255e-49
Identity = 102/184 (55.43%), Postives = 123/184 (66.85%), Query Frame = 2
Query:   89 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKK 634
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP +Q A+D  M+ +LDGT N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFM+ PVGA  F +
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDPIDQKALDQAMI-KLDGTEN-----KATLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKSFSE 181          

HSP 2 Score: 34.2686 bits (77), Expect = 2.255e-49
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  625 FQEAMKMGVEVYHHLKAVIK 684
            F E ++MG E++HHLKAV+K
Sbjct:  179 FSEGLRMGTEIFHHLKAVLK 198          
The following BLAST results are available for this feature:
BLAST of FC920652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_THEON1.018e-4960.43Enolase OS=Thermococcus onnurineus (strain NA1) GN... [more]
ENO_PSEPK1.327e-4956.59Enolase OS=Pseudomonas putida (strain KT2440) GN=e... [more]
ENO_PSEPG1.327e-4956.59Enolase OS=Pseudomonas putida (strain GB-1) GN=eno... [more]
ENO1_PSESM1.327e-4954.79Enolase 1 OS=Pseudomonas syringae pv. tomato GN=en... [more]
ENO_CLAHE1.730e-4957.61Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2[more]
ENO_PYRKO1.730e-4959.89Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV... [more]
ENO_BACHD1.730e-4955.49Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1[more]
ENO_BACLD1.730e-4956.83Enolase OS=Bacillus licheniformis (strain DSM 13 /... [more]
ENO1_CANAL2.255e-4959.68Enolase 1 OS=Candida albicans GN=ENO1 PE=1 SV=1[more]
ENO_PSEF52.255e-4955.43Enolase OS=Pseudomonas fluorescens (strain Pf-5 / ... [more]

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Properties
Property NameValue
Genbank descriptionC32011C09EF RVDevelop1 Citrus clementina cDNA clone C32011C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920652 ID=FC920652; Name=FC920652; organism=Citrus clementina; type=EST; length=712bp
GAGAACAAGACTCTTCTCGTTCCACAGACTCTCTCTCTCGTTCTAGATCT
TTCTTCGGTTTTCCAGCTTTCAGAAAATGGCCATAACCATCACTGCCGTC
AAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGA
CGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTG
CATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGAT
TACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCAT
TGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACA
ACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGC
AAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTATCTG
CAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCG
AACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTC
ATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTAT
GATTCTTCCTGTAGGAGCTTCCTGTTTCAAGAAGCCATGAAGATGGGTGT
AGAAGTATATCACCATCTGAAGGCTGTGATTAAAAAGAATACGGCCAGGA
TGCTACAATGTT
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