FC920654

Overview
NameFC920654
Unique NameFC920654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:20..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 66/176 (37.50%), Postives = 93/176 (52.84%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L   FY  TCP    I++  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL  +H+ GR  C
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQC 200          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST--RKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDG--VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L + +Y+ TCPQAE I+K  ++    ++     + +R +FHDC V+ CDAS+LLD T    T  +     +  +R F  I+ IK+A+E  CPGVVSCADI+  + RD    ++ G     + +GR DG  S A    ++L     ++S +   FA  G+    LV L  +H+VGR+HC
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 212          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 63/173 (36.42%), Postives = 96/173 (55.49%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            ++Y+ TCP    I++E V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P    ++  +   F   G     +VAL  +H++G +HC
Sbjct:   36 DYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHC 208          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 64/175 (36.57%), Postives = 97/175 (55.43%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L + FY+ +C  AE I+K++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L  +H++GR+HC
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHC 235          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS-RAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            FY  +C  A   I+  V+    R +  A S +R  FHDC V  CDAS+LL+ T    SE++   +F  +R F  I+  K  VE+ CPG+VSCADI+ ++ RD    +GGP   +K GRRD   + +A      LP  KD++  +   F+  G++   LVAL  +H++G++ C
Sbjct:   30 FYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQC 201          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 67/172 (38.95%), Postives = 92/172 (53.49%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            + Y  +CP    I+++QV +  K     A S +R  FHDC V  CDASLLLD      SEK  +      R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL  +H+ G+  C
Sbjct:   33 DIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKC 200          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            FY  +CP+A   IK  V     +      S LR  FHDC VQ CD S+LL+ T     E+  + + G +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP     ++ +   FA   +    LVAL  +H++G   C
Sbjct:   31 FYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQC 201          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 67/174 (38.51%), Postives = 91/174 (52.30%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L   FY  +CP A   I   V     +      S LR  FHDC +Q CDAS+LL+ T    ++   + +   R F  + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S        LP    S+  +L  ++   +DA  +VAL  +H++G+  C
Sbjct:   31 LSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTSGEQTQPP-NLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQC 202          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGID-APGLVALLRSHSVGRTHC 656
            +FY  TCPQ  DI    +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL   H+ G+  C
Sbjct:   27 SFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQC 199          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  126 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPG-LVALLRSHSVGRTHC 656
            D  L   FY  +CP   +I+++ +    +       S LR  FHDC V  CDAS+LLD+T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL   H+ G+  C
Sbjct:   27 DAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQC 205          
The following BLAST results are available for this feature:
BLAST of FC920654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER15_IPOBA8.366e-2637.50Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER2_MAIZE1.093e-2536.52Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER65_ARATH1.864e-2536.42Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER5_VITVI1.864e-2536.57Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER5_ARATH1.864e-2537.21Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER59_ARATH1.864e-2538.95Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER70_MAIZE2.434e-2539.18Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER42_MAIZE2.434e-2538.51Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER37_ARATH2.434e-2537.57Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1B_ARMRU4.152e-2535.75Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionC32011C11EF RVDevelop1 Citrus clementina cDNA clone C32011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920654 ID=FC920654; Name=FC920654; organism=Citrus clementina; type=EST; length=665bp
GGTTGGTCACCTTTCGTGAGTGAAGAGTAGAAGAGACAATGGGTACGAAA
GCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAG
GTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTT
ACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTTAAG
CTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACAT
TTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACT
CGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGTATG
AGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTG
CCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATG
GCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGA
GATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCA
CAAAGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTG
ACGCCCCTGGACTTGTTGCTCTGCTACGATCTCACAGTGTTGGCAGAACT
CATTGTGTGAAGCTG
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