FC920663

Overview
NameFC920663
Unique NameFC920663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDX_CYNPY (Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.890e-38
Identity = 78/128 (60.94%), Postives = 95/128 (74.22%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVFDQ-EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +G  AP+F A+AV    EF ++KL+DY GK YV+ FFYPLDFTFVCPTEI AFSDR  EF K+N E++  S DS F HLAW  T RK GGLG +K PL+AD  ++IS+ YGVL  D+GI+ RGLFIID
Sbjct:    8 IGKPAPEFQAKAVMPGGEFKDIKLADYRGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFRKINCELIAASVDSHFCHLAWTNTSRKEGGLGSMKIPLVADTKRTISQDYGVLKEDEGISFRGLFIID 134          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX3_PONAB (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Pongo abelii GN=PRDX3 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  245 LSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            L  GS   K F   +S   P +  + AP F   AV + EF ++ L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YGVL+   G+ALRGLFIID
Sbjct:   44 LCSGSSQAKLFSTSSSYHAPAVTQH-APYFKGTAVVNGEFKDLSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIID 190          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX3_HUMAN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Homo sapiens GN=PRDX3 PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  245 LSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            L  GS   K F   +S   P +  + AP F   AV + EF ++ L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YGVL+   G+ALRGLFIID
Sbjct:   44 LCSGSSQAKLFSTSSSCHAPAVTQH-APYFKGTAVVNGEFKDLSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIID 190          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX3_MOUSE (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus GN=Prdx3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 2
Query:  248 SRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            S  ++ + +F   +S   P +  + AP F   AV + EF  + L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++DITK IS+ YGVL+   GIALRGLFIID
Sbjct:   46 SASAQGKSAFSTSSSFHTPAVTQH-APYFKGTAVVNGEFKELSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDITKQISRDYGVLLESAGIALRGLFIID 191          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDX1_BRUMA (Thioredoxin peroxidase 1 OS=Brugia malayi GN=TSA1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37
Identity = 76/126 (60.32%), Postives = 96/126 (76.19%), Query Frame = 2
Query:  317 NTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKS-GGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            N APDF+  AV + +F  + + DY GK ++ILFFYPLDFTFVCPTEITAFSDR  EF+KLNTE++  S DS FSHLAW+QT R   GGLGD+K P++AD  K I+ ++GVL  + GI+ RGLF+ID
Sbjct:   37 NKAPDFSGTAVVNGDFKTISMKDYKGK-WLILFFYPLDFTFVCPTEITAFSDRCAEFQKLNTELIACSCDSHFSHLAWIQTPRSEVGGLGDMKIPVLADFNKDIANAFGVLDHETGISYRGLFLID 161          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX1_HUMAN (Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37
Identity = 76/128 (59.38%), Postives = 97/128 (75.78%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +G+ AP+F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR  EF+KLN +++G S DS F HLAWV T +K GGLG +  PL++D  ++I++ YGVL  D+GI+ RGLFIID
Sbjct:    8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIID 134          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX3_RAT (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus GN=Prdx3 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            P V   AP F   AV + EF  + L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YGVL+   GIALRGLFIID
Sbjct:   64 PAVTQHAPHFKGTAVVNGEFKELSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDLTKQISRDYGVLLESAGIALRGLFIID 191          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX1_RAT (Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +G+ AP F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR  EF+KLN +++G S DS F HLAW+ T +K GGLG +  PL++D  ++I++ YGVL  D+GI+ RGLFIID
Sbjct:    8 IGHPAPSFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIID 134          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX1_MYOLU (Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 74/128 (57.81%), Postives = 97/128 (75.78%), Query Frame = 2
Query:  311 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +G+ AP+F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR  EF+K+N +++G S DS F HLAW+ T +K GGLG +  PL++D  ++I++ YGVL  D+GI+ RGLFIID
Sbjct:    8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKINCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIID 134          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: PRDX3_BOVIN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Bos taurus GN=PRDX3 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37
Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  242 SLSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 691
            +L  GS   K     +S    P V   AP F   AV   EF  + L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+ +EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YGVL+   G+ALRGLFIID
Sbjct:   43 ALWSGSDQAKFAFSTSSSYHAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIID 191          
The following BLAST results are available for this feature:
BLAST of FC920663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
TDX_CYNPY2.890e-3860.94Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1[more]
PRDX3_PONAB8.408e-3853.69Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_HUMAN8.408e-3853.69Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_MOUSE1.434e-3753.38Thioredoxin-dependent peroxide reductase, mitochon... [more]
TDX1_BRUMA1.873e-3760.32Thioredoxin peroxidase 1 OS=Brugia malayi GN=TSA1 ... [more]
PRDX1_HUMAN1.873e-3759.38Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1[more]
PRDX3_RAT3.195e-3758.91Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_RAT3.195e-3758.59Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1... [more]
PRDX1_MYOLU4.173e-3757.81Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 ... [more]
PRDX3_BOVIN5.450e-3753.33Thioredoxin-dependent peroxide reductase, mitochon... [more]

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Properties
Property NameValue
Genbank descriptionC32011D09EF RVDevelop1 Citrus clementina cDNA clone C32011D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920663 ID=FC920663; Name=FC920663; organism=Citrus clementina; type=EST; length=719bp
GGCAACAGATAGCCACACTTTGCTTTTCCCCGTTCGTTGACTCCAGCTGA
ACAATAATACAACAACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCT
GCCACGGCAACAGCCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTC
TTCCTCAATCTCCCCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCG
GCCTCCGCAATCCCCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCC
CGCGGGTCCCGTTCTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAAT
ACCACCATTGGTGGGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTT
TCGATCAAGAGTTCATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAA
TATGTGATTCTCTTTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCAC
AGAAATCACTGCTTTCAGCGACCGATATACTGAATTTGAGAAGCTAAACA
CAGAGATATTGGGTGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGG
GTCCAAACAGACAGAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACT
AATTGCTGATATCACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCC
CTGATCAGGGAATTGCATTGAGAGGACTCTTTATTATTGACAAAGAGGAG
TCATCCAGCACTCAACCAT
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