FC920663

Overview
NameFC920663
Unique NameFC920663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig378 contig Ccv1_Contig378:50..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH2_PICTO (Probable peroxiredoxin 2 OS=Picrophilus torridus GN=PTO0727 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22
Identity = 53/135 (39.26%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  299 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEES 703
            +P  +G  APDF A          + LSDY   K+V+LF +P DFT +C TE   FS RY +F++LN E++G+S DS+ SH+ W++   +  G+ ++++P+IADI K I++ Y ++  + G  +RG+FIID  ++
Sbjct:    1 MPVYLGKRAPDFTANTTRGV----ISLSDY-KNKWVLLFSHPADFTPICTTEFIEFSRRYNDFKELNVELIGLSVDSLQSHIEWLKDIYEKFGI-EIQFPVIADINKEIAREYNLIDENAGNTVRGVFIIDPNQT 129          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 53/131 (40.46%), Postives = 79/131 (60.31%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQG--IALRGLFIID 691
            P +G  AP F A+  F      VK  D    ++V+LF +P DFT VC TE  AF+  Y EF+K N +++G+S DS FSH+AWV   ++  G+ ++ +P+IAD    ++K YG++ P Q     +R LF+ID
Sbjct:    7 PRLGEPAPAFEAQTTFGP----VKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKFGI-EIPFPIIADHNMEVAKKYGMIHPAQSTTFTVRALFVID 132          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH2_THETN (Probable peroxiredoxin 2 OS=Thermoanaerobacter tengcongensis GN=TTE2186 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 58/134 (43.28%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ--GIALRGLFIIDKEE 700
            P +G  APDF A + F      +KLSDY GK +V+LF +P DFT VC TE  AF+  YT F + N +++G+S DS  SHLAWV+   K+ G+ ++ +P+I D    I+K YG++ P +    A+R +FIID ++
Sbjct:   15 PQIGAPAPDFKANSTFGP----IKLSDYRGK-WVVLFSHPGDFTPVCTTEFIAFTQVYTSFVERNVQLIGLSVDSNPSHLAWVENIYKTTGV-EIPFPIIEDKDMRIAKLYGMISPAETSTSAVRAVFIIDDKQ 142          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDX_ENCCU (Putative thioredoxin peroxidase OS=Encephalitozoon cuniculi GN=ECU03_1190 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20
Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = 2
Query:  320 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEES 703
            T  D   +A  D E   + L DYIGK YV+L FYPLDFTFVCPTEI  FSD    F + N  +L +S DSV++H AW    R+  G+    +P++ D  + +   +G+   + G  +R   I+ K+ S
Sbjct:    5 TLTDSKYKAFVDGEIKEISLQDYIGK-YVVLAFYPLDFTFVCPTEINRFSDLKGAFLRRNAVVLLISCDSVYTHKAWASIPREQNGVLGTAWPMVWDAKRELCNQFGLYDEENGHPMRSTVILAKDLS 131          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWV-----QTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI--ALRGLFIIDKEESSST 712
            PL+G+ AP F A  V  Q  I     DY GK +VILF +P DFT VC TE   F+    EF  +NTE++G+S DSVFSH+AW+     + + K     ++K+P+I D+   ++K YG++ P      A+R +FIID E    T
Sbjct:    2 PLIGDDAPSFTA--VTTQGIIKFP-DDYKGK-WVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQPKASTTQAVRAVFIIDPEAKIRT 140          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19
Identity = 49/130 (37.69%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIID 691
            PL+G   P    +    ++     L D    K+ +LF +P DFT VC TE  AF  RY EF+KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P +G   +R +FI+D
Sbjct:    6 PLIGEEFPRLEVKTTHGKKI----LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPSKGTNTVRAVFIVD 130          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA-LRGLFIID 691
            P +G   P+        +    +KL D+   K+ +LF +P DFT VC TE  AF+ RY +F+KLNTE++G+S DS FSH+ W +  ++  G+ ++ +P+IAD T  ++K  G+L      A +R +F++D
Sbjct:    6 PSIGEKFPEIEVMTTHGK----IKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKLGV-EIPFPIIADPTGEVAKKLGLLHAQSSTATVRAVFVVD 130          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19
Identity = 49/130 (37.69%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIID 691
            PL+G   P    +    ++     L D    K+ +LF +P DFT VC TE  AF  RY EF KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P++G   +R +FI+D
Sbjct:    6 PLIGEEFPRVEVKTTHGKKV----LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPNKGTNTVRAVFIVD 130          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKE 697
            PL+G+  P+        +    +KL +    K+ +LF +P DFT VC TE  AF +RY EF KLN E++G+S D VFSH+ W++  ++   + ++++P+IAD T  +++  G++ P +G   +R +FI+D E
Sbjct:    3 PLLGDNFPEIEVVTTHGR----MKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKLDI-EIEFPVIADDTGRVAEMLGLIHPAKGTNTVRAVFIVDPE 129          
BLAST of FC920663 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  305 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL-IPDQGIALRGLFIID 691
            PL+G   P+        +    +KL DY   KY +LF +P DFT VC TE  AF+ RY +F+KLNTE++G+S DS FSH+ W++  ++  G+ ++ +P++AD   +++   G+L        +R +F+ID
Sbjct:    6 PLIGEKFPEMEVVTQHGK----IKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGV-EIPFPIMADPRGTVASKLGMLHAASSTHTVRAVFVID 130          
The following BLAST results are available for this feature:
BLAST of FC920663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
TDXH2_PICTO4.952e-2239.26Probable peroxiredoxin 2 OS=Picrophilus torridus G... [more]
TDXH_AQUAE2.458e-2140.46Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
TDXH2_THETN5.475e-2143.28Probable peroxiredoxin 2 OS=Thermoanaerobacter ten... [more]
TDX_ENCCU3.549e-2039.84Putative thioredoxin peroxidase OS=Encephalitozoon... [more]
TDXH_METMA6.053e-2041.26Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH_THEP11.761e-1937.69Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
TDXH_HYPBU2.300e-1936.92Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
TDXH_THEMA3.004e-1937.69Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
TDXH_ARCFU6.693e-1936.36Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]
TDXH_STAMF1.142e-1836.92Probable peroxiredoxin OS=Staphylothermus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC32011D09EF RVDevelop1 Citrus clementina cDNA clone C32011D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920663 ID=FC920663; Name=FC920663; organism=Citrus clementina; type=EST; length=719bp
GGCAACAGATAGCCACACTTTGCTTTTCCCCGTTCGTTGACTCCAGCTGA
ACAATAATACAACAACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCT
GCCACGGCAACAGCCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTC
TTCCTCAATCTCCCCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCG
GCCTCCGCAATCCCCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCC
CGCGGGTCCCGTTCTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAAT
ACCACCATTGGTGGGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTT
TCGATCAAGAGTTCATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAA
TATGTGATTCTCTTTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCAC
AGAAATCACTGCTTTCAGCGACCGATATACTGAATTTGAGAAGCTAAACA
CAGAGATATTGGGTGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGG
GTCCAAACAGACAGAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACT
AATTGCTGATATCACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCC
CTGATCAGGGAATTGCATTGAGAGGACTCTTTATTATTGACAAAGAGGAG
TCATCCAGCACTCAACCAT
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