FC920664

Overview
NameFC920664
Unique NameFC920664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length339
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:291..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP  T+F  KRLIGRRF D  V+ D  L P+K++ G  D     V   G  K+++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   61 NPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKG--DNGDAWVEEAG--KKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP  T+F  KRLIGRRF D  V+ D  L P+K++ G  D     V   G  K+++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   61 NPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKG--DNGDAWVEEAG--KKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_ALCBS (Chaperone protein dnaK OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 62/109 (56.88%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT++  KRLIGRRF D  VQ D+K+ P+K+    AD     V  KGE+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   61 NPENTLYAVKRLIGRRFDDKVVQKDIKMVPYKITK--ADNGDAWVEVKGEK--MAPPQISAQVLKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_ACTSZ (Chaperone protein dnaK OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+F  KRLIGRRF D  VQ D+ + PFK+I   AD     V+ KG++   A  ++S+ VL KM++ AE +LG T+  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   61 NPKNTLFAIKRLIGRRFEDNEVQRDVDIMPFKIIR--ADNGDAWVDVKGDK--LAPPQVSAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK2_VIBF1 (Chaperone protein dnaK 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+F  KRLIGRRF D  VQ D+++ PFK++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AVVTVPAYFND+QRQATKDAG IAGL+V
Sbjct:   60 NPQNTLFAIKRLIGRRFEDEEVQRDIEIMPFKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDV 164          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_TERTT (Chaperone protein dnaK OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.548e-24
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+F  KRLIGR+F+D  VQ D+K+ P+ ++   AD     V  KG++K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   61 NPRNTLFAVKRLIGRKFTDDVVQKDIKMVPYSIVG--ADNGDAWVEVKGDKK--APPQISAEVLKKMKKTAEDYLGEKVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 165          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB9 (Chaperone protein dnaK OS=Shewanella baltica (strain OS195) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.548e-24
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NPTNT F  KRLIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   60 NPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 164          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB8 (Chaperone protein dnaK OS=Shewanella baltica (strain OS185) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.548e-24
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NPTNT F  KRLIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   60 NPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 164          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB5 (Chaperone protein dnaK OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.548e-24
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NPTNT F  KRLIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   60 NPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 164          
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB2 (Chaperone protein dnaK OS=Shewanella baltica (strain OS223) GN=dnaK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.548e-24
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NPTNT F  KRLIGRRF D  VQ D+ + PFK+IA  AD     V  +G +   A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:   60 NPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIA--ADNGDAWVESRGNK--MAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 164          
The following BLAST results are available for this feature:
BLAST of FC920664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BARQU1.185e-2454.13Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE1.185e-2454.13Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_ALCBS1.185e-2456.88Chaperone protein dnaK OS=Alcanivorax borkumensis ... [more]
DNAK_ACTSZ1.185e-2455.96Chaperone protein dnaK OS=Actinobacillus succinoge... [more]
DNAK2_VIBF11.185e-2455.96Chaperone protein dnaK 2 OS=Vibrio fischeri (strai... [more]
DNAK_TERTT1.548e-2455.96Chaperone protein dnaK OS=Teredinibacter turnerae ... [more]
DNAK_SHEB91.548e-2455.96Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB81.548e-2455.96Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB51.548e-2455.96Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB21.548e-2455.96Chaperone protein dnaK OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32011D10EF RVDevelop1 Citrus clementina cDNA clone C32011D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920664 ID=FC920664; Name=FC920664; organism=Citrus clementina; type=EST; length=339bp
GGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTG
GTAGGAGATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCA
TTTAAGGTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTA
CAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGC
TCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAG
AATGCAGTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGC
CACCAAGGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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