FC920664

Overview
NameFC920664
Unique NameFC920664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length339
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:291..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_HALHL (Chaperone protein dnaK OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.494e-23
Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+   KRLIGRRF +  VQ D+K  P+K++   AD     V  +G  K+ A  E+S+  L KM+  AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   61 NPENTIHAVKRLIGRRFDEDVVQRDIKEMPYKIVK--ADNGDAWVEAQG--KKMAPPEVSARTLQKMKSTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BURS3 (Chaperone protein dnaK OS=Burkholderia sp. (strain 383) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.494e-23
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+F  KRLIGRRF +  VQ D+ L P+ ++   AD     V   GE+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   61 NPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYTIVK--ADNGDAWVEAHGEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.494e-23
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT++  KR +GRRF +  V  ++K+ P+KV  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   61 NPENTIYSIKRFMGRRFEE--VASEIKMVPYKVEKGQNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLDV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.494e-23
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT++  KR +GRRF +  V  ++K+ P+KV  G        VN    +KQ +  EIS+  L KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   61 NPENTIYSIKRFMGRRFEE--VASEIKMVPYKVEKGQNGDAR--VNISNIKKQMSPPEISAATLTKMKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLDV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_CHLFF (Chaperone protein dnaK OS=Chlamydophila felis (strain Fe/C-56) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP  T+   KR IGR++S+  V+ ++K  P+KV +G     +  V    E KQ+  EEI + +L+KM+E AEAYLG TI  AV+TVPAYFNDSQR +TKDAG IAGL+V
Sbjct:   66 NPEKTLASTKRFIGRKYSE--VESEIKTVPYKVTSGSNGDAVFQV----EGKQYTPEEIGAHILMKMKETAEAYLGETITEAVITVPAYFNDSQRASTKDAGRIAGLDV 168
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BURM1 (Chaperone protein dnaK OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT+F  KRLIGRRF +  VQ D+ L P+ +I   AD     V   G++   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   61 NPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEAHGQK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BORPD (Chaperone protein dnaK OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT++  KRLIGR+F + +VQ D+ L P+ ++   AD     V  +G  K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   61 NPKNTLYAVKRLIGRKFDEKAVQKDIDLMPYSIVK--ADNGDAWVEARG--KKIAPPQVSADVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NT++ AKR IGRRF +  +Q ++KL P+ V+A   D       +K + K  + EEI + VL K++++AE YLG  +  AVVTVPAYFND+QRQATKDAG IAGL V
Sbjct:   61 NPENTIYSAKRFIGRRFEE--IQEEIKLVPYTVVAKGND-----CAFKVQGKTASPEEIGAAVLAKLKKVAEDYLGEPVTEAVVTVPAYFNDAQRQATKDAGRIAGLEV 162
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: HSP7M_DICDI (Heat shock 70 kDa protein, mitochondrial OS=Dictyostelium discoideum GN=mhsp70 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.449e-22
Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            N  NT+F  KRLIGRRF D   + DM + P+K++ GP       V  KG  K  +  E  +MVL KM+E AE  LG  + +AV+TVPAYF+DSQRQAT+DAG IAGL V
Sbjct:   89 NAENTLFATKRLIGRRFDDPMTKKDMTMVPYKIVKGPNGDAWFEV--KG--KMISPSEAGAMVLQKMKETAETNLGGPVTDAVITVPAYFDDSQRQATRDAGTIAGLKV 193
[Close]
BLAST of FC920664 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.449e-22
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 2 
Query:   11 NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 337
            NP NTV+  KRLIGR F+D  V+ D ++ P+ ++        + V    E K+ +  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   60 NPRNTVYAVKRLIGRNFTDPMVKKDQEIVPYNIVKADNGDAWVEV----EGKKHSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 164
The following BLAST results are available for this feature:
BLAST of FC920664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HALHL8.494e-2354.13Chaperone protein dnaK OS=Halorhodospira halophila... [more]
DNAK_BURS38.494e-2354.13Chaperone protein dnaK OS=Burkholderia sp. (strain... [more]
DNAK_BORRA8.494e-2352.29Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORDL8.494e-2352.29Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_CHLFF1.109e-2252.29Chaperone protein dnaK OS=Chlamydophila felis (str... [more]
DNAK_BURM11.109e-2254.13Chaperone protein dnaK OS=Burkholderia multivorans... [more]
DNAK_BORPD1.109e-2252.29Chaperone protein dnaK OS=Bordetella petrii (strai... [more]
DNAK_BDEBA1.109e-2252.29Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
HSP7M_DICDI1.449e-2252.29Heat shock 70 kDa protein, mitochondrial OS=Dictyo... [more]
DNAK_RICBR1.449e-2249.54Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32011D10EF RVDevelop1 Citrus clementina cDNA clone C32011D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920664 ID=FC920664; Name=FC920664; organism=Citrus clementina; type=EST; length=339bp
GGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTG
GTAGGAGATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCA
TTTAAGGTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTA
CAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGC
TCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAG
AATGCAGTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGC
CACCAAGGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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