FC920669

Overview
NameFC920669
Unique NameFC920669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC920669 vs. ExPASy Swiss-Prot
Match: GUN10_ORYSJ (Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.224e-12
Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 3 
Query:  375 KYAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRD---MGLDLTKGMYDAGDHMKFGFPMAFTATVLSXAILEYGDQMDVV 620
            +Y +AL  A+ FF+ Q+SG L  +N +SWRG+S +KDG     +   L  G YDAGD +KF +PMA++ T+LS +++EY  + + +
Sbjct:  109 QYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAI 194
The following BLAST results are available for this feature:
BLAST of FC920669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
GUN10_ORYSJ1.224e-1241.86Endoglucanase 10 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionC32011E04EF RVDevelop1 Citrus clementina cDNA clone C32011E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920669 ID=FC920669; Name=FC920669; organism=Citrus clementina; type=EST; length=625bp
CAGCTGCTTCAATTTCATTGTATTAGAGAATTTGCTAAACTGATTCAGCA
GCCAAATTAAGCTTCTTACCACTCACCTTTCACCCACTAGAGAGAAATAC
GGTGCTGCGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTC
TCTTCACCCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGA
CGGCATTGTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGG
ATGGTTCTTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTT
ACACTATTAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTCCC
GGTCCCCCCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGC
AATGCAGTTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAAGA
TATCATGGAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTG
GATCTCACAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTT
TCCGATGGCTTTTACTGCGACTGTGTTGTCGTGNGCCATCCTTGAGTATG
GAGATCAGATGGACGTTGTGGATCA
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