FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 300.827 bits (769), Expect = 5.085e-81 Identity = 147/198 (74.24%), Postives = 169/198 (85.35%), Query Frame = 1 Query: 85 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PP+ Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPK 210
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.133e-80 Identity = 144/198 (72.73%), Postives = 169/198 (85.35%), Query Frame = 1 Query: 85 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 ++E K++K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PP+ Sbjct: 13 KEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPK 210
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 287.345 bits (734), Expect = 2.756e-77 Identity = 138/171 (80.70%), Postives = 157/171 (91.81%), Query Frame = 1 Query: 166 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 PYS IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT+IISPN+EDAKYV+++K+I K+VVGLGDK SPTDIE GMRVGVD+ KYQIQIPLPPKIDPSVTMMTVEEKPD TY+D+GGCKEQIEK+REVVELPMLHPEKFV+LGIDPP+ Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPK 240 HSP 2 Score: 23.0978 bits (48), Expect = 2.756e-77 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 675 KGVLCYGP 698 KGVLCYGP Sbjct: 240 KGVLCYGP 247
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.296e-76 Identity = 134/198 (67.68%), Postives = 166/198 (83.84%), Query Frame = 1 Query: 85 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGLA P+ WD+ +DKQ MQ+EQPLQVARCTKII+ + D +Y+INVKQ AKFVV L D V+PTDIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE P+LHPE++V LGI+PP+ Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPK 212
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.213e-74 Identity = 140/211 (66.35%), Postives = 168/211 (79.62%), Query Frame = 1 Query: 55 KESKAMAPEPED-EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIIS--PNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 KE +P D E +++KNP PLDE DI LLK+Y GPY+ + +++ + + K++ND GIKESDTGLA S WD+ +D+Q M EEQPLQVARCTKII ++E YVIN+KQIAKFVV LG++VSPTDIEEGMRVG DRNKY IQ+PLPPKIDPSVTMM VEEKPDVTY DVGGCKEQIE++REVVELP+L PE+FVKLGIDPP+ Sbjct: 4 KEDWEKYQKPVDTEEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPK 214
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.770e-71 Identity = 135/236 (57.20%), Postives = 167/236 (70.76%), Query Frame = 1 Query: 64 KAMAP-EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPN------------------------------SEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 K AP E +D+ D+ PL E DI +LK+YG PY+ +K+ E ++KD+ ++ + G+KESDTGLA WD++ D+Q + EE PLQVARCTKII N EDAKYVIN+KQIAKFVVGLG++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMMTVEEKPDVTY+DVGGCK+QIEK+REVVELP+L PE+F LGIDPP+ Sbjct: 9 KYKAPLEDDDKKPDDDKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPK 244
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: FB58_ARATH (F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.317e-20 Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 118 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 333 PLDEDDIAL+KTYGL PYS IKK EKEIK++ +K+NDLCGIKESDTGLA S KQMMQE QPLQV Sbjct: 9 PLDEDDIALVKTYGLVPYSAPIKKVEKEIKELTEKINDLCGIKESDTGLAPLS-------KQMMQEGQPLQV 73
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.119e-18 Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 1 Query: 145 LKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LK Y Y I++ E ++D + + L + G L + Q +QE V K++ K +I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD TY VGG EQI++++EV+ELP+ HPE F LGI P+ Sbjct: 27 LKNY----YIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVR----SLKEELQQLQEPGS-HVGEVVKVMGKK----KVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPK 191
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17 Identity = 57/184 (30.98%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 196 KEIKDMAKKVNDLCGIKESDTGLAAPSQWD---LVSDKQMMQEEQ--------------------PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 K+I+D+ K+V L KE ++ W L DK +++ E+ PL +A T+++ +D + + FV+ + +E G RV +++ + I LP + DP VT M VEEKPDV+Y +GG +EQ+ +++E VELP+ PE F K+GI+PP+ Sbjct: 10 KKIEDLKKEVRML---KEENSKTKRNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVL----DDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPK 186
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17 Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 349 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 ++S ED + V+ KFVV ++ +++ G RV +++ I LP DP V VEEKP+V+Y D+GG QIE++RE VELP+L PE F ++GI+PP+ Sbjct: 67 VVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPK 176 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |