FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17 Identity = 56/170 (32.94%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 169 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 Y+ I+ AE I +K +L ++ GL A + L+ ++ + +E V K + N K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE F LGI P+ Sbjct: 20 YTQKIQDAELAI---LQKTQNLRRLEAQRNGLNARVR--LLREEIQLLQEPGSYVGEVIKTMGKN----KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPK 180
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.180e-17 Identity = 49/158 (31.01%), Postives = 86/158 (54.43%), Query Frame = 1 Query: 205 KDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 + + +K N+L ++ L S+ ++ ++ + +E V K++ N K ++ V K+VV + + T I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 45 RQLRQKTNNLNRLEAQRNELN--SRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK 196
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.180e-17 Identity = 52/167 (31.14%), Postives = 93/167 (55.69%), Query Frame = 1 Query: 178 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 S ++ E +D+ +K+ DL + T S+ D+ S + + Q V K +S + K+++ ++VVG ++ ++++G RV +D I LP ++DP V M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PP+ Sbjct: 28 SYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQI-----VGEVLKQLS----EEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPK 185
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.766e-17 Identity = 62/186 (33.33%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 121 LDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L + ++ K G PY I K E+ +A+K +L ++ L A + L + Q++QE Q + +++ P + K ++ V KFVV L V D+ RV + Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 3 LTKMEVDSTKGEGFRPYY--ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 180
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.836e-17 Identity = 45/140 (32.14%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L +DK+ ++ E + +++ P + +D + ++ +FVV + + + + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPP+ Sbjct: 33 LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPK 172
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 8.836e-17 Identity = 54/175 (30.86%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 157 GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 G+ PY I++ E +I+ + V L + A + + D+ + +E V KI+S D K ++ V+ K++V + ++ D++ RV + + Y + L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRN-----ALNDKVRFIKDELRLLQEPGSYVGEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16 Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 157 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q + +++ P + K ++ V KFVV L + D+ RV + Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 183
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 283 DLVSDKQMMQEEQPL------QVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +L S +M++EE L V K++ N K ++ V K+VV + + T + RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK 196
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.968e-16 Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 199 EIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL------QVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +I+++ KVN+ K D + +L + +M++EE L VA K++ N K ++ V KFVV + V + R + Y + LP KIDP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 23 KIEELEIKVNE----KAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKN----KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPK 180
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.571e-16 Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L +DK+ ++ E + +++ P + +D + ++ +FVV + + + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPP+ Sbjct: 36 LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPK 175 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |