FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 349 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +I ED V N +FVV + + + G RV +D+ + LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPP+ Sbjct: 67 VIEVLDEDRAIVQNYNG-PRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPK 175
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L SD Q M++ PL V +I+ +D + ++ KFV + V ++E G V +++ + LP + D V M V+E PDV+Y+D+GG EQI ++REVVE P+ PE F K+G++PP+ Sbjct: 89 LRSDLQRMKKP-PLIVGTVEEIL----DDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPK 214
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16 Identity = 41/119 (34.45%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 322 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 PL + + ++I N+ ++ + + V + ++ ++ VG+DR+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPPR Sbjct: 81 PLVIGQFMEMIDQNNA----IVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPR 195
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16 Identity = 65/217 (29.95%), Postives = 107/217 (49.31%), Query Frame = 1 Query: 40 SSKLAKESKAMAPE--PEDEIKDEKNPRP--LDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 S++L KE KA E E EI D N + L E+ L + + + I K E E K++ ++ L +KE++ ++ + PL V + + K V+ F+V + V+P D+ G RV +++ + LP D M V+E+P+V Y D+GG ++Q++++REVVELP+ HPE F K+GI+PP+ Sbjct: 8 STELKKEKKAFTEEFKEEKEINDNSNLKNDLLKEE---LQEKARIAELESRILKLELEKKELERENLQL--MKENE----------ILRRELDRMRVPPLIVGTVVDKVG----ERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPK 205
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 53 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPK 179
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 367 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PP+ Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPK 173
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 286 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI P+ Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |