FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15 Identity = 37/103 (35.92%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 + KY++ +++VG+ + V + +++G+RV +D I LP + DP V MT E+ ++T++ +GG EQI ++REV+ELP+ +PE F ++GI PP+ Sbjct: 114 EEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPK 216
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 1 Query: 124 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSED----------------AKYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +ED +A + T + + ++ + +K+ A++ N C IKE+ +K + ++ P V +I+ N ED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLG+ PP+ Sbjct: 13 EEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQ-------------EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPK 206
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 50/166 (30.12%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 193 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PP+ Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 50/166 (30.12%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 193 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PP+ Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 50/166 (30.12%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 193 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PP+ Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 50/166 (30.12%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 193 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PP+ Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.842e-14 Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 1 Query: 124 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSED----------------AKYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 +ED +A + T + + + + +K+ A++ N C IKE+ +K + ++ P V +I+ N ED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLG+ PP+ Sbjct: 13 EEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQ-------------EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPK 206
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |