FC920709

Overview
NameFC920709
Unique NameFC920709
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14180 contig Ccv1_Contig14180:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PONAB (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo abelii GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30
Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_MACFA (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca fascicularis GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30
Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAECN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_HUMAN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo sapiens GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30
Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_DROME (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.075e-26
Identity = 66/154 (42.86%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQG-----RAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G N N+ ++  L+ +GVI S  V++ M+  DR  + P    PY+D+P  IG   TISAPHMHA  L+ L ++LKPG   LD+GSG+GYLTACF   +  +G     R VG+EH  ELV  S  N+     + +L  G L +  GDGRK +
Sbjct:    3 WRSVGAN-NEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRN--PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKGY 152          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_DICDI (Probable protein-L-isoaspartate O-methyltransferase OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  242 LQHYG--VITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMH-ALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            L HY   ++ +K + E ++ +DR  F+ +     PY D P  IGYNATISAPHMHA  L LL + +      ALDIGSG+GY+TAC   ++G  GR +GVEHIPEL+  SI++I++  +  L     +   VGDG K W
Sbjct:   57 LLHYQKRMVLNKTIVETLKFVDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADRIPMSNGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLL---DRIQFLVGDGIKGW 192          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_FERNB (Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.893e-19
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 637
            + EHLQ+YGV  S+K+ E M  +DR  FVP       Y+D P+ IGY  TISAPHM     + LE  LK G   L+IG+G+GY  A  +L+VG  G    +E IPELV  + + I       LL   ++++ VGDG++
Sbjct:    2 LFEHLQYYGV--SRKIIEAMNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYLE--LKDGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRIN------LLGINNITIIVGDGKE 129          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_AERPE (Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix GN=pcm PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 637
            MVE L+  G++TS++V E M  + R  FVP       Y D P+ IG+  TISAP +    LQLL+   +PG   LD+G+G+GY +A  A +V P GR   VE IPEL   + +N+EK+        G + V VGDG K
Sbjct:   41 MVEQLRRSGLVTSRRVLEAMARVPRHLFVPPEYRGMAYEDRPLPIGHGQTISAPGVVGRMLQLLDP--QPGEKVLDVGAGSGYQSALLAELVTPGGRVYAVERIPELAEYARENLEKTG-----YRGVVEVVVGDGSK 171          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METKA (Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri GN=pcm PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 2
Query:  230 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            +VE L+  G I S +V+E M  + R  FVP+      YVDSP+ IG   TISAPHM A   +LL+   +PG   L++G+G+GY  A  A +V P GR + VE IPEL   +  N++K+     +K     V VGDG K +
Sbjct:   15 LVERLKSLGYIRSNRVAEAMLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIMTELLDP--RPGHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKKTGYDRFVK-----VLVGDGTKGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METTP (Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  218 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDG 631
            + + ++E L++Y    S++V E M  + R  FVP+   P  Y D P+ IG+  TISAPHM A    LL+  L+ GM  L++G G GY  A  A +VGP G    VE IPELV  + +N+E++      +  ++S+ +GDG
Sbjct:    2 RKERLIESLRNY---VSERVVEAMSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLLD--LREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERA------RYRNVSMILGDG 130          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_METJA (Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus jannaschii GN=pcm PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.155e-17
Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  218 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDG 631
            + KA++E L   G I SK+V + +  + R  F+P+    Y  VD+P+ IGY  TISA HM     +LL+  LKPGM  L+IG+G GY  A  A +VG  G  V +E IPEL   + + + K      L   ++ V VGDG
Sbjct:    6 QKKAVIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK------LGYDNVIVIVGDG 137          
The following BLAST results are available for this feature:
BLAST of FC920709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_PONAB9.057e-3046.31Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MACFA9.057e-3046.31Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_HUMAN9.057e-3046.31Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DROME6.075e-2642.86Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DICDI1.267e-2344.60Probable protein-L-isoaspartate O-methyltransferas... [more]
PIMT_FERNB1.893e-1942.03Protein-L-isoaspartate O-methyltransferase OS=Ferv... [more]
PIMT_AERPE4.217e-1942.03Protein-L-isoaspartate O-methyltransferase OS=Aero... [more]
PIMT_METKA7.193e-1941.43Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METTP4.662e-1838.57Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METJA5.155e-1740.00Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC32012A10EF RVDevelop1 Citrus clementina cDNA clone C32012A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920709 ID=FC920709; Name=FC920709; organism=Citrus clementina; type=EST; length=643bp
TGGTTTAAAGCACACATTATCAACCTTCACTCTTATCCCTCACCGTCATC
GCTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTG
TCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCAC
GGGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGA
GTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCAT
TATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGA
TCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAA
TGGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACA
TGCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGA
TATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTG
GACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCT
TCATCAATCCAGAATATTGAAAAAAGTGCAGCGGCTCCATTGCTGAAAGA
AGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAAAAAGCTGG
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