FC920713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.948e-34 Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 +EEM RD VF +GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPV+ E+ +LY Sbjct: 14 QEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILY 176
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 5.029e-34 Identity = 70/172 (40.70%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE++RD VF +GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + + A+HSQ +++ PG+++V+ + +AKGL+K+AIR NPV++ E+ L+Y + +P E Sbjct: 44 DEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSE 215
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.568e-34 Identity = 73/163 (44.79%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 +EEM RD VF MGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + A + I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY Sbjct: 14 QEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILY 176
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.578e-34 Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = 3 Query: 9 EMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 EM D VF MGE+VG Y G+YKVTKGL +KYG RVLDTPI E FTG+G+GAA GL+P+VE M F + A + I N+ +Y S GQ + +GA+HS S++ S PG++++ + +A+GL+KAAIR +PV+ E+ LLY Sbjct: 39 EMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLY 199
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.578e-34 Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 +EEM +DP V +GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++ E +P+E+ Sbjct: 15 DEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEED 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.578e-34 Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NL*ERIPDEE 521 +EEM +DP V +GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++ E +P+E+ Sbjct: 15 DEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEED 188
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.496e-33 Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE++RD VF +GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E Sbjct: 44 DEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPE 215
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 2.496e-33 Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE++RD VF +GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E Sbjct: 44 DEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPE 215
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 3.260e-33 Identity = 69/172 (40.12%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL*ERIPDE 518 +EE++RD VF +GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y S G + A+HSQ +++ PG+++V+ +AKGL+K+AIR +NPV++ E+ L+Y + +P E Sbjct: 44 DEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTE 215
BLAST of FC920713 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.257e-33 Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 3 EEEMDRDPHVFPMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 491 EEEM RD VF +GE+V Y G+YK+++GL DK+G RV+DTPI E FTG+ GAA GLRPI E M F + A + I N+ Y SGG + A+HSQ ++ SIPG+++V+ + +A+GL+KAAIR NPV++ E+ +LY Sbjct: 49 EEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILY 211 The following BLAST results are available for this feature:
BLAST of FC920713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920713 ID=FC920713; Name=FC920713; organism=Citrus clementina; type=EST; length=522bpback to top |