FC920715

Overview
NameFC920715
Unique NameFC920715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:38..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 514
            + LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S    ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GPVKGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  512 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTLYYGVTEYTXG 712
            +   MLR GDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELT  +GV +Y  G
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHG 69          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32
Identity = 61/125 (48.80%), Postives = 87/125 (69.60%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 493
            R LH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 2
Query:  512 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTLYYGVTEYTXG 712
            L   MLR G+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT  +    Y  G
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLG 69          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32
Identity = 61/125 (48.80%), Postives = 87/125 (69.60%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 493
            R LH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 2
Query:  512 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTLYYGVTEYTXG 712
            L   MLR G+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT  +    Y  G
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLG 69          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 83/235 (35.32%), Postives = 109/235 (46.38%), Query Frame = 2
Query:  128 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVAELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYA--EEDQT----TVLELTLYYGVTEYTXGMH 718
            H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R  +  RS++FY+  LGMKLLRT +    K+TL  LGY   + D      +VLELT  +G TE     H
Sbjct:   25 HTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWG-TENDPNFH 256          

HSP 2 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVAELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG 496
            +F H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  182 KFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  116 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTLYYGVTEYT 706
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFVAELTYNYG+  Y +G  F    +A+               N  R   P+      +   + P GY F L  R P+  +P+ +V L   DL +S+ ++   LGMK+    ++ ++    A+LGYA  D    LEL    G  +++
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYA--DDQCKLELQGIQGAVDHS 196          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20
Identity = 76/220 (34.55%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  128 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVAELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTLYYG 691
            H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    + ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+R  D   SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT  +G
Sbjct:   14 HTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG 229          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  116 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTLYYGVTEY 703
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFVAELTYNYG+  Y +G  F    +A+               N  +   P+      I   + P GY F L  R P+  +P+ +V L   DL +S+ ++   LGMK+    ++ +     A+LGYA  D    LEL    G  ++
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYA--DNQCKLELQGIQGAVDH 195          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 59/188 (31.38%), Postives = 95/188 (50.53%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 649
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L  GDL +S K++ + LGM ++      E K T   L + E
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGE 172          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 2
Query:  119 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRAGDLGRSIKFYEKALGMKLL 592
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V +  GDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of FC920715 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 64/205 (31.22%), Postives = 91/205 (44.39%), Query Frame = 2
Query:  116 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVAELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 649
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFVAELTYNYGV  Y +G  F    +A+               N  +   P+      +   + P GY F L  R  P  +P+ +V L   DL +S+ ++   LGMK+    +K E K   A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYAD 194          
The following BLAST results are available for this feature:
BLAST of FC920715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGUL_HAEIN1.342e-3555.30Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB3.095e-3248.80Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA3.095e-3248.80Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST1.539e-2335.32Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
GLOD4_RAT2.458e-2131.58Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
LGUL_SCHPO1.593e-2034.55Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_MOUSE1.033e-1931.25Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEBR4.338e-1831.38Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL1.649e-1730.77Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN2.380e-1631.22Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC32012B04EF RVDevelop1 Citrus clementina cDNA clone C32012B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920715 ID=FC920715; Name=FC920715; organism=Citrus clementina; type=EST; length=720bp
GATCTCTCACACTTGCGACTTTCCCCGACTTTCTGAGTGATTCCATATCA
AAATGGCTGAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGGAATGG
CCAAAGAAAGATAAGCGACGCTTCCTTCATGCTGTGTATCGTGTTGGTGA
TCTTGATCGCACCATCAAATTTTACACTGAATGCTTTGGGATGAAGCTGT
TGAGAAAGAGAGACGTCCCAGAAGAGAAATACTCAAATGCCTTTCTTGGA
TTTGGCCCCGAACAGTCTCACTTTGTTGCGGAGTTAACATACAACTATGG
TGTAACTTCATATGATATTGGAACTGGTTTTGGCCATTTTGCAATTGCAA
CTGAAGATGTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTGGCAAT
GTCACTAGAGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATTGCCTT
TGTGAAGGATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAA
CTCCTGAACCACTCTGTCAAGTAATGCTTCGCGCTGGCGATCTTGGTCGC
TCCATCAAGTTCTATGAAAAGGCTTTGGGGATGAAACTGTTAAGGACAGT
TGATAAACCTGAATACAAGTACACCCTGGCCATGCTTGGATATGCTGAGG
AAGATCAGACTACTGTTCTGGAGTTAACTTTATATTATGGTGTGACTGAA
TATACCNAGGGAATGCATAT
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