FC920731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPB_HUMAN (Vesicle-associated membrane protein-associated protein B/C OS=Homo sapiens GN=VAPB PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAPPRPPSP 583 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ +V V +Q + P+ + K KF++Q + A + + ++ + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPTDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENDKP 132
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPB_BOVIN (Vesicle-associated membrane protein-associated protein B OS=Bos taurus GN=VAPB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAPPRPPSP 583 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ +V V +Q + P+ + K KF++Q + A + + ++ + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPTDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENDKP 132
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPA_BOVIN (Vesicle-associated membrane protein-associated protein A OS=Bos taurus GN=VAPA PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 45/154 (29.22%), Postives = 78/154 (50.65%), Query Frame = 2 Query: 212 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPR---ASVSD 634 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P T V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P P++ ++G P+ S+SD Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNISDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD 169
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: SCS2_YEAST (Vesicle-associated membrane protein-associated protein SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 2 Query: 200 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEEC--KLRVLYVAPP 568 + I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN VV P T V V E P D +C+DKFL+ + + K + + EA + K++V Y+ P Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKYLISP 129 The following BLAST results are available for this feature:
BLAST of FC920731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920731 ID=FC920731; Name=FC920731; organism=Citrus clementina; type=EST; length=740bpback to top |