FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 6.065e-68 Identity = 120/226 (53.10%), Postives = 168/226 (74.34%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y++ ++ VD ++L+PG + ++ ++ L E D V M+V++ P E Y+DIGGLD QIQE+ EA+ LP+ H E +E++GI+PPKGV++YG PGTGKTLLA+A A T ATFL++ G +L+Q ++GDG KLVR+ F +A + +PSI+FIDE+DA+G KR+D+ G+RE+QRTMLELLNQLDGF V+VI TNR++ LDPALLR GR+DRKI+F P Sbjct: 97 YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 322
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.035e-67 Identity = 127/227 (55.95%), Postives = 173/227 (76.21%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y V I +D ++ P + + N + +L +VDP+V++MKVEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID++G+ R ++ SG G+ E+QRTMLELLNQLDGF++ ++V++ TNRI+ LD ALLRPGRIDRKI+F P Sbjct: 107 YVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.010e-67 Identity = 124/223 (55.61%), Postives = 173/223 (77.58%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDF 670 + V + +D + + P C + + N ++ +L ++VDP+VS+M VEK P +Y IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ +++VI+ TNRI+ LD ALLRPGRIDRKI+F Sbjct: 90 FVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 311
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67 Identity = 121/228 (53.07%), Postives = 167/228 (73.25%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 ++ ++ VD D L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E +E +GI+PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F +A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++VI TNR + LDPAL+R GR+DRKI+F P + Sbjct: 117 FLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67 Identity = 119/228 (52.19%), Postives = 168/228 (73.68%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 ++ ++ VD D L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++VI TNR + LDPAL+R GR+DRKI+F P + Sbjct: 117 FLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.706e-67 Identity = 119/228 (52.19%), Postives = 168/228 (73.68%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 ++ ++ VD D L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E +E +G++PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + +P I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++VI TNR + LDPAL+R GR+DRKI+F P + Sbjct: 118 FLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 345
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.706e-67 Identity = 119/228 (52.19%), Postives = 168/228 (73.68%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 ++ ++ VD D L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E +E +G++PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + +P I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++VI TNR + LDPAL+R GR+DRKI+F P + Sbjct: 118 FLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 345
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.144e-66 Identity = 124/218 (56.88%), Postives = 166/218 (76.15%), Query Frame = 2 Query: 26 VDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V+ D ++PG ++ + L++V LL D V M++ +P E Y DIGGL QI E++EAVELPL PEL+ IGI+PPKGV+LYG PGTGKTLLAKAVA+ T+A F+RVVGSEL+QKY+G+G +LVRELF +A +P+I+FIDEIDAVG R +A++ G+RE+QRT+++LL +DGF++RGDV++I TNRI+ LD ALLRPGR DR I+ P Sbjct: 132 VNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLP 349
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 2.548e-66 Identity = 118/225 (52.44%), Postives = 168/225 (74.67%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 ++ ++ VD ++L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH + ++ +GI+PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S ++VI TNR + LDPAL+R GR+DRKI+F P Sbjct: 123 FLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 347
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.328e-66 Identity = 123/228 (53.95%), Postives = 170/228 (74.56%), Query Frame = 2 Query: 26 VDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD*ETYFQI 709 VD+++LEPG + ++ + ++VV +L E D V M+V+++P SY DIGGLD QI+EI+E VE PL PEL+E +G++PPKGV+LYG PGTGKTLLAKAVAN ATF+R+ EL+QK++G+G +LVRELF +A + +PSI+FIDEIDA+G +R + G+RE+QRT+ +LL ++DGFD D++VI TNR + LDPALLRPGR DR I P+ D E ++I Sbjct: 133 VDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIK--IPLPDEEGRYEI 358 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |