FC920741

Overview
NameFC920741
Unique NameFC920741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G  +P
Sbjct:    8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_SHIDS (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ydcW PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTV 639
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL V
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAV 123          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLU (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T EV+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGEVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G++V+A SGKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   11 IHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1
Query:  250 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            PVQ  Y    I+GQ VDA SGKTF   +P T +VIA V      D++RAV +A +   +  W  MT  ERSRI+ RA +++ +  +ELA LET + GK   ++   ++     ++ YYAG A  I G+ +P
Sbjct:    5 PVQQLY----IHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEG--QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLP 129          
The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
BETB_PSEA86.896e-1838.71Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
ABDH_SHIDS9.006e-1840.65Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ABDH_ECOLU9.006e-1841.32Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
BETB_ACIBY1.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT1.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS1.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC1.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB51.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB31.176e-1739.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_STRM51.536e-1739.69Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]

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Properties
Property NameValue
Genbank descriptionC32012E02EF RVDevelop1 Citrus clementina cDNA clone C32012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bp
TGCAGTTGCAAGCTTCACTTGCTAGGACAAAAGTTGCAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGCTATGG
CAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCT
TCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGG
CATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCAC
CTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGAC
GCAGCATCAGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGT
GATTGCTAATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTG
CTACTGCTCGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCT
TATGAGAGGTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAA
CATGGAGGAGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATG
TACAATCTCTCNAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTAT
TATGCTGGATGGGCTGATAAAATCCATGGACTAACCGTCCCTGGTGATGG
AAATACCATATTCAACTTTACATGAACCATTGGCGTTG
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