FC920741

Overview
NameFC920741
Unique NameFC920741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOBW (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO8A (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO5E (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO57 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO55 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRTECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO24 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 1
Query:  250 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            P Q+ Y    I G++V A  G T  V +P T EV+ANV     +D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   +V     +L YYAG A  + G  VP
Sbjct:    5 PDQLLY----IGGRYVPARGGHTLEVVNPATGEVLANVHNAGVDDLDAAVDSAKAG--QQRWAALTTVERSRILLRAVALLRERNDALAQLETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            K  I+G + DA S  TF   +P   EV+A+V     ED++RAV +A K   +  W  MT  ERSRI+ RA D++ +  +ELAALET + GK + ++   ++     +L YYAG    I G  +P
Sbjct:    8 KLYIDGAYSDAGSDATFEAINPANGEVLAHVQRATKEDVERAVVSAEKG--QKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGEQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G+ VDA SG+TF V +P    ++A + +    D+D AV  A++   E  W  MT  ERSRI+LRA  L+ +  +ELA LET N GKP  ++   ++      L YYAG A  I G  +P
Sbjct:   11 IGGRPVDATSGETFTVTNPYDGSLLATIGQASQADVDSAVQAAQRGQRE--WAAMTGMERSRILLRAVALLRERNDELAELETRNTGKPISETASVDIVTGADALEYYAGLAPAIEGSQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 45/117 (38.46%), Postives = 74/117 (63.25%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHG 630
            I+G+++ A   +   + +P   E IA V+EG  ED  +A+A AR+AFD+G W  ++  ER +I+L+ A+LI +++EELA LE+ + GK   +S  +++  +  +  YYAG ADK  G
Sbjct:    7 IDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEES-KADMDDIANVFQYYAGLADKDGG 122          
The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
ABDH_ECOBW2.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO8A2.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO5E2.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO572.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO552.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO242.620e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
BETB_XANAC4.470e-1739.69Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
BETB_PSEPF4.470e-1738.71Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_CHRSD4.470e-1740.50Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
BETB_BACSU4.470e-1738.46Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]

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Properties
Property NameValue
Genbank descriptionC32012E02EF RVDevelop1 Citrus clementina cDNA clone C32012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bp
TGCAGTTGCAAGCTTCACTTGCTAGGACAAAAGTTGCAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGCTATGG
CAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCT
TCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGG
CATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCAC
CTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGAC
GCAGCATCAGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGT
GATTGCTAATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTG
CTACTGCTCGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCT
TATGAGAGGTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAA
CATGGAGGAGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATG
TACAATCTCTCNAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTAT
TATGCTGGATGGGCTGATAAAATCCATGGACTAACCGTCCCTGGTGATGG
AAATACCATATTCAACTTTACATGAACCATTGGCGTTG
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