FC920741

Overview
NameFC920741
Unique NameFC920741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_SHIF8 (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=ydcW PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEVSAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ENT38 (Gamma-aminobutyraldehyde dehydrogenase OS=Enterobacter sp. (strain 638) GN=Ent638_2124 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  277 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            LING+ V+   G+  PVY+P T EV+  +AE  A  +D AV  A +AF E  W   TP  R+  +L+ AD+IE++ E  A LE+ N GKP    +  E+P VV +  ++AG A  ++GL
Sbjct:    6 LINGELVNG-EGEKQPVYNPATGEVLLEIAEASAAQVDAAVRAADRAFSE--WGHTTPKARAECLLKLADVIEEHAETFARLESQNCGKPLHCVISDEIPAVVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            K  I+G + DA S  TF   +P   EV+A V     ED++RAV +A K   +  W  MT  ERSRI+ RA D++ +  +ELAALET + GK + ++   +V     +L YYAG    I G  +P
Sbjct:    8 KLYIDGGYSDAGSDATFEAINPANGEVLAQVQRATKEDVERAVVSAEKG--QKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETQYVDVVTGADVLEYYAGLVPAIEGEQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 48/144 (33.33%), Postives = 82/144 (56.94%), Query Frame = 1
Query:  259 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHG-LTVPGDGNTIFNFT*TIGV 687
            +++ +  I+G++  + SG+ F   +P T EVIA V      ++D AV +A++   +  W  M+P ER RI+ +AA+L+ +N EELA LE  + GKP  +++  ++     ++ YYAG  DKI G     G+GN  +     +G+
Sbjct:    1 MAHQQQYIHGRYHASTSGEHFETINPATGEVIATVEHAGQAELDAAVESAKQG--QKVWSAMSPVERGRILKKAAELLRENNEELARLEVLDTGKPLQEAIVVDIQTGADVIEYYAGLTDKIQGDYQDLGNGNFFYTRREPLGI 142          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            ING++  +A  +T+   DP   EVIA V     ++ID AV +A++AF    W K+   E+  ++++ A+L EK+ + LAA+E  ++GKP V +   +V   + LL Y AGWADKI+G  +P
Sbjct:   25 INGEWHKSA--ETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT--WKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIP 141          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOUT (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL6 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6 GN=ydcW PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL5 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECOK1 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=ydcW PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_ECO81 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=ydcW PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121          
The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
ABDH_SHIF84.470e-1740.50Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ABDH_ENT384.470e-1741.18Gamma-aminobutyraldehyde dehydrogenase OS=Enteroba... [more]
BETB_PSEFS5.838e-1739.52Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_MARMS5.838e-1733.33Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]
YLX7_SCHPO7.624e-1738.84Putative aldehyde dehydrogenase-like protein C922.... [more]
ABDH_ECOUT7.624e-1739.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL67.624e-1739.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL57.624e-1739.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOK17.624e-1739.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO817.624e-1739.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionC32012E02EF RVDevelop1 Citrus clementina cDNA clone C32012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bp
TGCAGTTGCAAGCTTCACTTGCTAGGACAAAAGTTGCAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGCTATGG
CAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCT
TCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGG
CATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCAC
CTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGAC
GCAGCATCAGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGT
GATTGCTAATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTG
CTACTGCTCGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCT
TATGAGAGGTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAA
CATGGAGGAGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATG
TACAATCTCTCNAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTAT
TATGCTGGATGGGCTGATAAAATCCATGGACTAACCGTCCCTGGTGATGG
AAATACCATATTCAACTTTACATGAACCATTGGCGTTG
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