FC920746

Overview
NameFC920746
Unique NameFC920746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 2
Query:  350 NLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSG 682
            N GFG   TD+M  +K      +  G+L  +  + L P++ VL+Y Q +FEGLKAYR+ DG++  FRPE+N  R Q  + R+ MP   V+ F+EA  A V  +++W+P  G
Sbjct:   26 NPGFGRHFTDHMVTIKWTEGRGWHDGQLVPYAPLSLDPATMVLHYAQEIFEGLKAYRRPDGSVATFRPEKNGARFQASSRRLGMPELPVDTFIEACDALVAQDEKWVPAHG 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  341 DWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIP 673
            D  +LGFG   TDYM+VM       +    +  +  + L PSS V +YGQ +FEGLKAYR  DG +LLFRP++N  R+    ERM MP    E  +EA+   V   K W+P
Sbjct:   18 DPSSLGFGQYFTDYMFVMDYEEGIGWHHPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCERMSMPPLDEELVLEALTQLVELEKDWVP 128          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 2
Query:  341 DWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIP 673
            D + L FG   TD+M+VM    D  +    +  +  + + P++ V +YGQ +FEGLKAY  +D ++LLFRPE+N  R+    +R+C+P    EQ +E +K  V  +K WIP
Sbjct:   19 DPNQLSFGRVFTDHMFVMDYAADKGWYDPRIIPYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSNDRLCIPQIDEEQVLEGLKQLVAIDKDWIP 129          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  356 GFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSG 682
            GFG   TD+M  +       +    +  +G IEL PS+ VL+Y Q +FEGLKAYR  DG+I+ FR + NA R++  A R+ +P      F+E+++  +  +K W+P +G
Sbjct:   30 GFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAG 138          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 2
Query:  341 DWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPP-SGKGPYI 697
            D   LGFG   TDYM       D  +   ++  +G IE+SP++  ++YGQ +FEGLKAY+K DG + LFRP+EN  R+     R+ MP  +  + +E +K  V   + W+P   G+  YI
Sbjct:   18 DTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKK-DGEVALFRPDENFKRLNNSLARLEMPQVNEGELLEGLKQLVDLEREWVPEGEGQSLYI 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCA1_SCHPO (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=eca39 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  296 SSHTLSNETIQLADI-DWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIP 673
            SSH       +L  + +W +L FG   TD+M +MK  R+  +S  E+  FG +   P+S V +YG   FEG+KA+R + G   LFRP +NA RM     R+ +PS    +  E ++  V    RW+P
Sbjct:   15 SSHIKVTNVKELKPLPEWKSLKFGENFTDHMLIMKWNREKGWSTPEIVPFGKLCFHPASSVFHYGFECFEGMKAFRDEKGVPRLFRPIKNAERMLSTGTRISLPSFDPAELAEIIRKFVAHENRWVP 141          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  353 LGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPP-SGKGPYI 697
            LGFG   TDYM       D  +   ++  +G IE+SP++  ++YGQ +FEGLKAY K+DG + LFRPEEN  R+     R+ MP     + +E +K  V   + WIP   G+  YI
Sbjct:   22 LGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYI 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  353 LGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPP-SGKGPYI 697
            LGFG   TDYM       D  +   ++  +G IE+SP++  ++YGQ +FEGLKAY K+DG + LFRPEEN  R+     R+ MP     + +E +K  V   + WIP   G+  YI
Sbjct:   22 LGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYI 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  353 LGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPP-SGKGPYI 697
            LGFG   TDYM       D  +   ++  +G IE+SP++  ++YGQ +FEGLKAY K+DG + LFRPEEN  R+     R+ MP     + +E +K  V   + WIP   G+  YI
Sbjct:   22 LGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYI 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  353 LGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPP-SGKGPYI 697
            LGFG   TDYM       D  +   ++  +G IE+SP++  ++YGQ +FEGLKAY K+DG + LFRPEEN  R+     R+ MP     + +E +K  V   + WIP   G+  YI
Sbjct:   22 LGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYI 136          
The following BLAST results are available for this feature:
BLAST of FC920746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ILVE_STRCO8.357e-1940.54Probable branched-chain-amino-acid aminotransferas... [more]
ILVE1_BACSU1.425e-1843.24Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]
ILVE2_BACSU7.822e-1738.74Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE_MYCTU1.927e-1537.61Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAR2.516e-1538.33Probable branched-chain-amino-acid aminotransferas... [more]
BCA1_SCHPO3.286e-1536.22Branched-chain-amino-acid aminotransferase, mitoch... [more]
ILVE_STAAW5.605e-1540.52Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAS5.605e-1540.52Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN5.605e-1540.52Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM5.605e-1540.52Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionC32012E09EF RVDevelop1 Citrus clementina cDNA clone C32012E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920746 ID=FC920746; Name=FC920746; organism=Citrus clementina; type=EST; length=698bp
GGAAGGACTTTAACAATAAAGGTCAAATCAGGAACCCAGCTTCCACAGAG
AAGGAGATATGGAGAGAAGCAGCAGCGCAGTAATGGCTGGCCTTCAGCCG
AATAGCCTAATCTGTCCTTTCGCTTCTTCACGTAATGGTTGTACGCTCTT
CCTCCCCATTCCCAATTCCTTCTCCTCCGCCGCCGGACAAAGCCGTCATT
GCCTTCCTCCCTTATCTCTCAAGCTTCAAAAGCAAACTGCTTTCACTCCT
TACCATGTGAACCAAACGGACTCTCCTTTCAAGCTTTTTTCCGTTTCATC
TCATACTCTCAGCAATGAAACGATTCAATTAGCCGACATAGATTGGGACA
ACCTTGGATTTGGGTTTTGTCCTACTGATTATATGTACGTCATGAAATGT
GGAAGAGATGGAAACTTCTCTAAAGGTGAATTACAGCGTTTTGGTAACAT
TGAGTTGAGTCCATCCTCTGGAGTCTTAAATTATGGCCAGGGATTATTCG
AAGGCCTGAAAGCCTACAGGAAACAAGATGGTAACATTCTTCTCTTTCGT
CCTGAGGAAAATGCAATGCGGATGCAGGTGGGTGCGGAGCGGATGTGCAT
GCCATCACCATCAGTTGAACAGTTTGTGGAAGCTGTTAAGGCTACTGTTT
TAGCAAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTCCTTATATAT
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