FC920748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3) HSP 1 Score: 56.9954 bits (136), Expect = 5.160e-14 Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 423 EFDWYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIR 605 E+ +WDVGGQ IR W++YF+ T GL++VVD +D R+ + EL +L + +R Sbjct: 57 EYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELR 117 HSP 2 Score: 38.5058 bits (88), Expect = 5.160e-14 Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 304 GLD +GKTTI+ K+ + PT+GFN++T+ Y+ Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59 HSP 3 Score: 22.3274 bits (46), Expect = 5.160e-14 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 598 LSGASLLILANKQDINGAL 654 L A LL+ ANKQD+ A+ Sbjct: 116 LRDAVLLLFANKQDLPNAM 134
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3) HSP 1 Score: 56.9954 bits (136), Expect = 5.160e-14 Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 423 EFDWYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIR 605 E+ +WDVGGQ IR W++YF+ T GL++VVD +D R+ + EL +L + +R Sbjct: 57 EYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELR 117 HSP 2 Score: 38.5058 bits (88), Expect = 5.160e-14 Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 304 GLD +GKTTI+ K+ + PT+GFN++T+ Y+ Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59 HSP 3 Score: 22.3274 bits (46), Expect = 5.160e-14 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 598 LSGASLLILANKQDINGAL 654 L A LL+ ANKQD+ A+ Sbjct: 116 LRDAVLLLFANKQDLPNAM 134
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.613e-13 Identity = 25/58 (43.10%), Postives = 44/58 (75.86%), Query Frame = 3 Query: 438 TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRGI 611 ++ +WDVGGQ IR+ W++Y+ T+ +++VVD +D R+D+ K E+DNLL ++ ++GI Sbjct: 70 SMTVWDVGGQHKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGI 127 HSP 2 Score: 28.4906 bits (62), Expect = 2.613e-13 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 598 LSGASLLILANKQDINGALTPQRLL 672 L G +L+LANKQD+N A+ ++ Sbjct: 124 LKGIQILVLANKQDMNNAMNTAEIV 148
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.400e-13 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAI 602 + LN+WD+GGQR IR YWRNYFE TD L++V+D +D +R ++ EL LL+EE + Sbjct: 61 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKL 116 HSP 2 Score: 21.557 bits (44), Expect = 3.400e-13 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDI 642 ++LS +LI ANKQD+ Sbjct: 114 EKLSCVPVLIFANKQDL 130
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.400e-13 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAI 602 + LN+WD+GGQR IR YWRNYFE TD L++V+D +D +R ++ EL LL+EE + Sbjct: 61 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKL 116 HSP 2 Score: 21.557 bits (44), Expect = 3.400e-13 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDI 642 ++LS +LI ANKQD+ Sbjct: 114 EKLSCVPVLIFANKQDL 130
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 4.421e-13 Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 423 EFDWYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIR 605 E+ +WDVGGQ IR WR+YF+ T GL++VVD +D R+ + L +L E+ ++ Sbjct: 57 EYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQ 117 HSP 2 Score: 38.5058 bits (88), Expect = 4.421e-13 Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 304 GLD +GKTTI+ K+ + PT+GFN++T+ Y+ Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 4.421e-13 Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 423 EFDWYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIR 605 E+ +WDVGGQ IR WR+YF+ T GL++VVD +D R+ + L +L E+ ++ Sbjct: 57 EYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQ 117 HSP 2 Score: 38.5058 bits (88), Expect = 4.421e-13 Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 304 GLD +GKTTI+ K+ + PT+GFN++T+ Y+ Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: AR13B_DANRE (ADP-ribosylation factor-like protein 13B OS=Danio rerio GN=arl13b PE=2 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 6.392e-13 Identity = 20/58 (34.48%), Postives = 39/58 (67.24%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRG 608 + + I+D+GG + IR W+NY+ ++ G+V+VVD SD++R+ + + + +L+ I G Sbjct: 65 FEVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAG 122 HSP 2 Score: 34.6538 bits (78), Expect = 6.392e-13 Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQK*ELFI 322 GLDN+GKT V I GE ++PT+GF+ + K E+ I Sbjct: 28 GLDNAGKTATVRGIQGESPLDVAPTVGFSKVDLKQGKFEVTI 69 HSP 3 Score: 28.1054 bits (61), Expect = 6.392e-13 Identity = 11/27 (40.74%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 595 RLSGASLLILANKQDINGALTPQRLLK 675 R++G +L+LANKQD +GA+ +++ Sbjct: 119 RIAGKPVLVLANKQDQDGAMAEADIIE 145
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_CAEEL (ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans GN=arl-3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.453e-13 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 441 LNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRGI 611 LN+WD+GGQR+IR YW NY+E D L++V+D +D +R D+ +EL LL EE +R + Sbjct: 64 LNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKV 120 HSP 2 Score: 21.1718 bits (43), Expect = 7.453e-13 Identity = 9/28 (32.14%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDINGALTPQRLLK 675 ++L +LI ANKQD+ A + + + + Sbjct: 115 EKLRKVPVLIFANKQDLVTAASSEEITR 142
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_HUMAN (ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 7.453e-13 Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAI 602 + LN+WD+GGQR IR YW+NYFE TD L++V+D +D +R ++ EL LL+EE + Sbjct: 61 FKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKL 116 HSP 2 Score: 21.557 bits (44), Expect = 7.453e-13 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDI 642 ++LS +LI ANKQD+ Sbjct: 114 EKLSCVPVLIFANKQDL 130 The following BLAST results are available for this feature:
BLAST of FC920748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920748 ID=FC920748; Name=FC920748; organism=Citrus clementina; type=EST; length=692bpback to top |