FC920751

Overview
NameFC920751
Unique NameFC920751
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6470 contig Ccv1_Contig6470:63..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 65/143 (45.45%), Postives = 94/143 (65.73%), Query Frame = 3
Query:  273 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR--AFCAGGDVAAVV-----RGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRL 680
            R++TLNRP++LNAL+A+M   + +    Y       L+ILK   R  +FCAGGDVA V      +   +  KFF+ E+ LN+ +ATY KP V+ ++GI MGGG G+SIH  FR+ATEN+ +AMPE  +G FPD+G+++   R+
Sbjct:   48 RVITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRI 190          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: YNGF_BACSU (Putative enoyl-CoA hydratase/isomerase yngF OS=Bacillus subtilis GN=yngF PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16
Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  276 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            ++TLNRP+  NALSA+M+  L  + Q  E +SN++ +IL G G +AFCAG D+   ++ + E     S   I     L+    +P ++ +NG  +GGG  +++    R+ATE +V  +PET L + P  G +    RL G
Sbjct:   16 LITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIK-LKEDQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIG 154          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: ECHM_CAEEL (Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  258 ETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            E   V ++ LNRP+ LNAL AQ+++ L +  +  +TD +V  +++ G  RAF AG D+  +    NE A  FS  F+ N+  ++   KP ++ +NG  +GGG  +++      A E + F  PE  +G  P  G +  + R  G
Sbjct:   41 EKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTN--NEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAG 182          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: PAAG_ECOLI (Probable enoyl-CoA hydratase paaG OS=Escherichia coli (strain K12) GN=paaG PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 3
Query:  246 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKF----FSKEFILNYL---MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            +L      V  LTLNRP +LN+ + +M ++L E  ++ E D  ++ L+L G GR FCAG D+    R ++          S E   N L   +A   KP +  +NG+  G GA +++ G   +A  ++ F M  + LGL PD G ++   R+ G
Sbjct:    5 ILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLND--RNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAG 156          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CRT_CLOAB (3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum GN=crt PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 47/151 (31.13%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  240 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVR-GINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            + V+ E+   V ++T+NRP+ LNAL++  +  +  +    E DS V  +IL G G ++F AG D++ +      EG KF      +   +    KP ++ +NG  +GGG  +++    R+A+ N+ F  PE  LG+ P  G +    RL G
Sbjct:    4 NNVILEKEGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKEMNTIEGRKFGILGNKVFRRLELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVG 154          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: ECHH_RHIME (Probable enoyl-CoA hydratase OS=Rhizobium meliloti GN=fadB1 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 46/154 (29.87%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  240 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            + +L E    V ++TLNRP+ LNAL+A ++  L    + ++ D  V  ++L G  +AF AG D+   ++G++     F   ++ ++L     +A   KP ++ ++G  +GGG  +++   F +A+E + F  PE  LG+ P +G S    R  G
Sbjct:    4 ETLLVETQGRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGADIKE-MQGLD-----FVDGYLADFLGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVG 151          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: ECH14_MYCTU (Probable enoyl-CoA hydratase echA14 OS=Mycobacterium tuberculosis GN=echA14 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 44/153 (28.76%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  231 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL-MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            +Q D VL      V ++T+N P + NA++ +M ++L    QR E D +V  +++ G G+AFCAG D++A+  G+ + A+         ++ +++   P ++ +NG  +G G  +++    R+A   ++F      LGL P  GA++   R  G
Sbjct:    2 AQYDPVLLSVDKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSALGAGVGDPAEPRLLRLYDGFMAVSSCNLPTIAAVNGAAVGAGLNLALAADVRIAGPAALFDARFQKLGLHPGGGATWMLQRAVG 154          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: ECH14_MYCBO (Probable enoyl-CoA hydratase echA14 OS=Mycobacterium bovis GN=echA14 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 44/153 (28.76%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  231 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL-MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            +Q D VL      V ++T+N P + NA++ +M ++L    QR E D +V  +++ G G+AFCAG D++A+  G+ + A+         ++ +++   P ++ +NG  +G G  +++    R+A   ++F      LGL P  GA++   R  G
Sbjct:    2 AQYDPVLLSVDKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSALGAGVGDPAEPRLLRLYDGFMAVSSCNLPTIAAVNGAAVGAGLNLALAADVRIAGPAALFDARFQKLGLHPGGGATWMLQRAVG 154          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 42/145 (28.97%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  267 FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVA--AVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPGFFG 695
            FV +LT++ P   NALS++++  L     + ETD+ V+ +I+ G+GR F AG D+     ++G  + +    +   L   + ++ KP ++ ++G  +GGG  +++    R+A E++   +PE  LG+ P    +    RLP + G
Sbjct:   11 FVAVLTIHNP-PANALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQ---RLPRYVG 151          
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 3
Query:  255 EETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY------TKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686
            E+   V ++TLNRP+ LNALS  +IS +    + ++ D +V  +I+ G  +AF AG D       I E  K    +   N L+A +       KP ++ +NG  +GGG  +++     +A E +VF  PE  LG  P  G +   +R  G
Sbjct:   29 EKKGRVGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGAD-------IKEMEKVTLPDAYNNDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIG 171          
The following BLAST results are available for this feature:
BLAST of FC920751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
HIBCH_YEAST2.839e-3045.453-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
YNGF_BACSU2.333e-1635.71Putative enoyl-CoA hydratase/isomerase yngF OS=Bac... [more]
ECHM_CAEEL1.975e-1532.64Probable enoyl-CoA hydratase, mitochondrial OS=Cae... [more]
PAAG_ECOLI5.747e-1532.47Probable enoyl-CoA hydratase paaG OS=Escherichia c... [more]
CRT_CLOAB2.852e-1431.133-hydroxybutyryl-CoA dehydratase OS=Clostridium ac... [more]
ECHH_RHIME4.865e-1429.87Probable enoyl-CoA hydratase OS=Rhizobium meliloti... [more]
ECH14_MYCTU4.118e-1328.76Probable enoyl-CoA hydratase echA14 OS=Mycobacteri... [more]
ECH14_MYCBO4.118e-1328.76Probable enoyl-CoA hydratase echA14 OS=Mycobacteri... [more]
FADB_BACSU7.025e-1328.97Probable enoyl-CoA hydratase OS=Bacillus subtilis ... [more]
ECHM_DICDI7.025e-1332.00Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC32012F02EF RVDevelop1 Citrus clementina cDNA clone C32012F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920751 ID=FC920751; Name=FC920751; organism=Citrus clementina; type=EST; length=709bp
GAACTCGCGCCTGATGAGATGTCAAACGCCTTGCCCCTGCGGCCACGGTG
ACGTCTCTCAAAAAGTTGTCCATATCTCTCTTGCAAACGTTCTGAAGATG
AACCAAACCTGTCTGTAATAACTTGTGATTGGTGAATTGAATCGAGAGAG
AAGAGATCGTTTCCGCATTCCCTATTCGTCTTCCCGTTTTTCCAGCTCTA
TCAAGTTCGTTCAAGATGGCTTCCGCTCAATCACAGGAAGACCAGGTCTT
AGAAGAAGAGACCTCATTTGTAAGAATATTGACACTAAACAGGCCCAGGC
AATTGAATGCACTTTCAGCTCAAATGATTTCTCGGTTATTGGAACTTTTC
CAGCGCTATGAGACCGATTCGAACGTGAAGCTCTTAATTCTCAAGGGAAA
AGGAAGGGCATTTTGTGCTGGTGGTGATGTGGCCGCAGTTGTTCGCGGTA
TTAATGAGGGTGCCAAATTCTTTTCCAAGGAGTTCATCCTGAATTATTTG
ATGGCAACGTACACCAAACCCCAGGTTTCAATTCTTAATGGAATTGTCAT
GGGAGGTGGGGCTGGTGTTTCAATACATGGTAGATTCCGAGTTGCTACTG
AGAATTCGGTATTTGCAATGCCTGAGACAGCTTTGGGACTTTTCCCAGAT
ATTGGTGCCTCTTATTTCTTTGTCAGACTCCCTGGATTCTTCGGAGAATA
TGTTGGTCT
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