FC920760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.753e-17 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL L Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLAL 73
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 77.0258 bits (188), Expect = 8.653e-14 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL L Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTL 73
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14 Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 617 + V++ +T + D++ +K ++ K +P Q L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFL 158 HSP 2 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 18 TIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 ++ +K ++ K +P L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L GG Sbjct: 29 SVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14 Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 195 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL--HLVLR 626 VK L G + V +S T+ +K +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + T+ HL LR Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLR 153 HSP 2 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 45/137 (32.85%), Postives = 73/137 (53.28%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 V +S T+ ++K +I K G+P RL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + T+ LRLRGG Sbjct: 19 VTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13 Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 180 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 G + VK L G + + SS ++ +KA+I K G+ QQRL +G L+D LA + ST+ LV+ + + I V+ G++ T EV + T+ ++K ++ EG+ D L F GK LED L +Y ++ ST+ + LRL Sbjct: 2 GWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRL 154 HSP 2 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 + SS ++ ++KA+I K G+ RL +G L+D LA + ST+ LV+ + + I V+ G++ T EV + T+ ++K ++ EG+ D L F GK LED L +Y ++ ST+ + LRLRGG Sbjct: 19 LSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 219 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 617 +T + SD + + I+ + + Q L+ K L+ R L+ Y I KE+T+HL L++ + + G+ L V S ++ VK I++ +PP +Q + GK+LEDG+ +ADYNI+ S L L Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFL 154
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103 The following BLAST results are available for this feature:
BLAST of FC920760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920760 ID=FC920760; Name=FC920760; organism=Citrus clementina; type=EST; length=630bpback to top |