FC920780

Overview
NameFC920780
Unique NameFC920780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.178e-82
Identity = 146/207 (70.53%), Postives = 178/207 (85.99%), Query Frame = 1
Query:   79 GNKTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLAL 699
            G+K+ LQS+ L +YILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+M LKLINAKNTMEIGV+T YSLLATALAIPDDGKILA+DI +E+YE GLP I+KAGVAH+I FREGPALP+LDQL++D+K HGT+DF+FVDADK+NYINYHKR+I+LVKVGG+IGYDNTLW GSVV  PDA + + +   RD V EL + LA+
Sbjct:    4 GHKSKLQSDALRQYILETSVYPREPESMKELREVTAKHPWNLMRTSADEGQFLNMSLKLINAKNTMEIGVYTDYSLLATALAIPDDGKILAMDINRENYEIGLPKIEKAGVAHRIQFREGPALPVLDQLVEDKKNHGTYDFIFVDADKDNYINYHKRIIDLVKVGGLIGYDNTLWNGSVVGPPDAPMRKYLRYCRDFVLELIKALAV 210          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.224e-81
Identity = 148/228 (64.91%), Postives = 187/228 (82.02%), Query Frame = 1
Query:   22 SANREGQEENKDRYYKTLH---GNKTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLA 696
            +A  + Q+ N +   KT H   G+K+LL+S+ LY+YIL+TSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+ML+KLI AK TMEIGV+TGYSLLATALA+P+DG ILA+DI +E+YE GLP I+KAGVAHKIDFREGPALP+LD LI +EK HG+FDFVFVDADK+NY+NYH+RL++LVK+GG+IGYDNTLW GSVV   DA + + I  +RD V  LN+ LA
Sbjct:    8 AAPAQEQQANGNGEQKTRHSEVGHKSLLKSDDLYQYILDTSVYPREPESMKELREVTAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPCIEKAGVAHKIDFREGPALPVLDDLIAEEKNHGSFDFVFVDADKDNYLNYHERLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALA 235          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.146e-79
Identity = 143/224 (63.84%), Postives = 180/224 (80.36%), Query Frame = 1
Query:   25 ANREGQEENKDRYYKTLHGNKTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLA 696
            AN  G  E K R+ +   G+K+LL+S+ LY+YIL+TSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+ML+KLI AK TMEIGV+TGYSLLATALA+P+DG ILA+DI +E+YE GLP I KAGV HKIDFREGPALP+LD L+ D++ HG+FDF FVDADK+NY+NYH+RL++LV+ GG+IGYDNTLW GSVV   DA + + I  +RD V  LN  LA
Sbjct:   20 ANGNGNGEQKTRHSEV--GHKSLLKSDDLYQYILDTSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPCINKAGVGHKIDFREGPALPVLDDLVADKEQHGSFDFAFVDADKDNYLNYHERLLKLVRPGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLALNSALA 241          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.928e-67
Identity = 122/207 (58.94%), Postives = 160/207 (77.29%), Query Frame = 1
Query:   85 KTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLALIQ 705
            K LL+SE+LY+YILETSVYPREP+ L+E+R +T  HP + M TAPD  Q + MLL L+NA+ T+E+GVFTGYSLL TAL +P+DGK++A+D+ ++ YE GLP+I+KAGV HKIDF+E  ALP LD+L+ ++   G FDF FVDADK NY NYH+RLI L+KVGG+I YDNTLWGGS VA+PD+   E  +  + +  ELN+ L+  Q
Sbjct:    7 KGLLKSEELYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNARKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGS-VAEPDSSTPEWRIEVKKATLELNKKLSADQ 212          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.466e-60
Identity = 116/201 (57.71%), Postives = 151/201 (75.12%), Query Frame = 1
Query:   91 LLQSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPL 693
            LLQSE+L++YIL+TSV+PRE + LKE+R+ T+ HP S M T+P   Q LS +LK +  K T+E+GVFTGYSLLATAL+IPDDGKI A+DI +E Y  GL +I+KAGV  KI F    A+ LLD L+ D +Y G++DF FVDADK NY+NYH+RLIELVKVGG+I YDNTLWGG+ VA P++++ + +      V +LN  L
Sbjct:   18 LLQSEQLHQYILDTSVFPRESEHLKELRKATESHPMSFMGTSPLAGQLLSFMLKTVKPKKTIEVGVFTGYSLLATALSIPDDGKITAVDIDREAYNVGLALIKKAGVESKISFIVSDAMTLLDDLLADGRYQGSYDFAFVDADKTNYVNYHERLIELVKVGGIIAYDNTLWGGT-VALPESEVPDFMKNNWVCVTKLNEIL 217          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53
Identity = 113/207 (54.59%), Postives = 151/207 (72.95%), Query Frame = 1
Query:   85 KTLLQSEKLYEYILETSVYPREPQCLKEIRELT-DKHPWSAMMTAP-DEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLAL 699
            K +L+SE L +YI+ETS YPRE + LKE+R+ T  K+   + M  P DE  FLSML+K++NAKNT+EIGVFTGYSLL TALA+P+DG+I A+DI KE YE GL  I+KAGV HKI+F     L  LDQL+ D+     FDF F DADK++Y+N+H+RL++LVKVGG+I +DNTLW G  VA+ +  + E +  +R ++ E N+ LAL
Sbjct:    8 KGILKSEALKQYIMETSAYPREHELLKELRKATVQKYGNLSEMEVPVDEGHFLSMLVKIMNAKNTIEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIHSDGLKALDQLVNDK---CEFDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLWFG-FVAEDEDGVPEHMREYRAALIEFNKKLAL 210          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.926e-52
Identity = 107/206 (51.94%), Postives = 147/206 (71.36%), Query Frame = 1
Query:   85 KTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKH--PWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLA 696
            K +LQSE L +YI ETS YP E + LKE+RE T K     S M    DE +FLSMLLKL+NAK T+E+GVFTGYSLL+TALA+P+DG++ A+D  +  YE GLP IQKAGV  KI+F +  A P+L++++ ++K    FDF FVDADK++Y +YH++L++LVK+GG+I YDNTLW G V  + D ++ E +   R  + E N+ L+
Sbjct:    8 KGILQSEALKQYIYETSAYPGEHEQLKELREATTKKYGSLSGMSVPVDEGRFLSMLLKLMNAKRTLEVGVFTGYSLLSTALALPEDGQVTAIDKDRGAYEIGLPFIQKAGVEDKINFIQSEAPPILNEMLCNDK-QPEFDFAFVDADKSSYKHYHEQLLKLVKIGGIIAYDNTLWYGLVAKEVDDEVPEPLRMVRTVIMEFNKLLS 212          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.696e-49
Identity = 103/207 (49.76%), Postives = 148/207 (71.50%), Query Frame = 1
Query:   82 NKTLLQSEKLYEYILETSVYPREPQCLKEIRELTDKH--PWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNRPLA 696
            +K +L+SE L +YI+ET+ YPRE + LKE+RE T +     S M    DE+ FLSML+K+INAKNT+EIGVFTGYSL   ALA+P+DG+I A+DI +  Y  GL  ++KAGV HKI+F +  A+  LDQL+  EK    +DF FVDADK NY+ + ++L++LVKVGG+I +DNTLW G+++ Q + ++   +  +R+++ E N+ LA
Sbjct:    7 DKGILKSEALKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKIINAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNLGLEFMKKAGVDHKINFIQSDAVRGLDQLLNGEKQE--YDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWFGTLI-QKENEVPGHMRAYREALLEFNKILA 210          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30
Identity = 70/181 (38.67%), Postives = 109/181 (60.22%), Query Frame = 1
Query:   97 QSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADL 639
            +  +L++Y+L  S+  RE   L+ +R LT + P    M   ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P DG+++  ++  +  E G P+ ++A   HKID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GG++     LW G V+  P  D+
Sbjct:   50 EDSRLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE-AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDV 227          
BLAST of FC920780 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29
Identity = 74/169 (43.79%), Postives = 105/169 (62.13%), Query Frame = 1
Query:  133 SVYPREPQCLKEIRELTDKHPWS-AMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDAD 636
            SV  RE   L+E+ ++T + P   AM   P+EAQFL +L++L+ A+  +EIG FTGYS L  A A+P  G+I+  DI+ +    G P  Q+AGV   ID R G A   L +L ++    G FD VFVDADK  Y++Y+++ + LV+ GG++  DNTL+ G  VA P AD
Sbjct:   17 SVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGR-VADPAAD 183          
The following BLAST results are available for this feature:
BLAST of FC920780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_CITNA7.178e-8270.53Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT1_MAIZE1.224e-8164.91Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=... [more]
CAMT2_MAIZE1.146e-7963.84Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT3_ARATH2.928e-6758.94Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_STELP3.466e-6057.71Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH1.080e-5354.59Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT_POPKI5.926e-5251.94Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH4.696e-4949.76Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
CMTD1_HUMAN3.738e-3038.67Catechol-O-methyltransferase domain-containing pro... [more]
MDMC_STRMY5.398e-2943.79O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32012H11EF RVDevelop1 Citrus clementina cDNA clone C32012H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920780 ID=FC920780; Name=FC920780; organism=Citrus clementina; type=EST; length=709bp
GATGGTATTCTGTAAGTAATGTCCGCGAATCGGGAAGGTCAGGAGGAAAA
CAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACCCTTTTACAGA
GTGAAAAACTTTATGAGTATATACTTGAAACCAGTGTATATCCAAGAGAA
CCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGCATCCATGGAG
CGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGCATGCTACTCA
AGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTTCACTGGTTAC
TCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGC
CCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAA
AAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCT
CTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTT
CGTCTTTGTTGATGCTGACAAGAATAACTACATTAATTACCACAAGAGGC
TTATTGAGCTTGTGAAGGTTGGGGGAGTGATTGGCTACGACAACACCTTG
TGGGGTGGATCTGTGGTGGCACAACCTGATGCCGACCTGGATGAGCTAAT
CTTAGGCTGGAGGGATTCTGTGCAGGAACTCAACAGGCCCCTGGCGTTGA
TCCAAGGAT
back to top