FC920782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_BRANA (Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.872e-55 Identity = 100/136 (73.53%), Postives = 114/136 (83.82%), Query Frame = 1 Query: 283 SHFPITARPISTHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 S FP TAR IS + P N+ +LGFG RP PDPA++ SAIAQGPDDDVP+PGQQFAQFGAGCFWG ELA+QRVPGVTKTEVGYS G++ NP+YEDVCS TT HNE+VRVQYDPKE SF++LLD+FW RHDP TL Sbjct: 38 SPFPKTARSISVYKSPMNNLFTRLGFGSRPQPDPAAS--SAIAQGPDDDVPSPGQQFAQFGAGCFWGAELAYQRVPGVTKTEVGYSHGFVDNPTYEDVCSETTGHNEIVRVQYDPKEVSFESLLDVFWKRHDPTTL 171
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_ARATH (Peptide methionine sulfoxide reductase OS=Arabidopsis thaliana GN=PMSR PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.070e-54 Identity = 100/135 (74.07%), Postives = 113/135 (83.70%), Query Frame = 1 Query: 289 FPITAR-PISTHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 FP T+R PIS + P N+ N+LGFG RP A ++AIAQGPDDDVP+ GQQFAQFGAGCFWGVELA+QRVPGVTKTEVGYS G +HNPSYEDVC+GTT HNEVVRVQYDPKECSF++LLD+FW RHDP TL Sbjct: 39 FPQTSRRPISVYKSPMNNLFNRLGFGSRPQAQ-ADPSSAAIAQGPDDDVPSSGQQFAQFGAGCFWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFESLLDVFWNRHDPTTL 172
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.363e-52 Identity = 98/142 (69.01%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 283 SHFPITA-RPI-----STHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 S FP+T+ +P+ S+ M+ L +LG G R +P AS + S+IAQGPDDD+PAPGQQFAQFGAGCFWGVELAFQRVPGV+KTEVGY+QG+LHNP+Y D+CSGTTNH+EVVRVQYDPK CSFD+LLD FW RHDP TL Sbjct: 33 SSFPVTSTKPLFTLRHSSSTPKIMSWLGRLGXGTR-TPADASMDQSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVSKTEVGYTQGFLHNPTYNDICSGTTNHSEVVRVQYDPKACSFDSLLDCFWERHDPTTL 173
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SOLLC (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum GN=E4 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 388 STENSAIAQGPDDDVP-APGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 ST N A+ PD D P PG +FAQF AGCFWGVELAFQRV GV KTEVGYSQG +H+P+Y+ +CSGTT H E +R+Q+DP C + LL +FW+RHDP TL Sbjct: 10 STTNPAL--DPDLDSPDQPGLEFAQFAAGCFWGVELAFQRVGGVVKTEVGYSQGNVHDPNYKLICSGTTEHAEAIRIQFDPNVCPYSNLLSLFWSRHDPTTL 109
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_FRAAN (Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31 Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 385 ASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 +ST N+ D PG + AQF +GCFWG EL FQRV GV KTEVGYSQG++H+P+Y VCSGTTNH+EVVRVQ+DP+ C + LL +FW+RHDP TL Sbjct: 3 SSTTNNPALDLDSDTPENPGHELAQFASGCFWGSELRFQRVVGVIKTEVGYSQGHVHDPNYRLVCSGTTNHSEVVRVQFDPQVCPYSDLLSVFWSRHDPTTL 104
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_METTH (Peptide methionine sulfoxide reductase msrA OS=Methanobacterium thermoautotrophicum GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23 Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 454 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 A FGAGCFWGVE AF++V GV T VGY G+L NP+YEDVC+G T H EVV V +DP + LLD+FW+ HDP TL Sbjct: 10 ATFGAGCFWGVEDAFRKVDGVVSTRVGYMGGHLENPTYEDVCTGLTGHAEVVEVTFDPDVVGYSDLLDVFWSIHDPTTL 88
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALAI (Peptide methionine sulfoxide reductase msrA OS=Salinispora arenicola (strain CNS-205) GN=msrA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 442 GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 G Q A FG GCFWG E F +PGV T VGY+ GY NPSYE+VCSG T H EVV+V+YDP + +++ LL +FW HDP Sbjct: 44 GTQVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYEEVCSGRTGHAEVVQVRYDPTKIAYEDLLKVFWENHDP 123
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_METMJ (Peptide methionine sulfoxide reductase msrA OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 433 PAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPT 687 P + A FGAGCFWGVE AF+RVPGV +T VG+ G + NP+Y +VC+G T H EVV+V YDP S+ LLD FW HDP T Sbjct: 3 PEKSLERATFGAGCFWGVEEAFRRVPGVVETAVGFMGGTVENPTYPEVCTGRTGHAEVVQVTYDPGTVSYRALLDTFWDAHDPTT 87
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_PSEMY (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas mendocina (strain ymp) GN=msrA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R P P + ++ PAP QQ A FG GCFWG E F + PGV T VGY+ G+ NP+YE+VCSG T H EVV V +DP++ SFD LL +FW H+P Sbjct: 24 RAEPLPVAQQHHVNGNPIKPPFPAPMQQ-AVFGLGCFWGAERRFWQQPGVFSTAVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDPQQTSFDALLKVFWEAHNP 127
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_DICDI (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum GN=msrA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 454 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 A F AGCFW VEL FQRV GVTKT VGY+ G + NP+Y VCSG T E V ++YDP++ +++ LL +FW++HDP TL Sbjct: 4 ATFAAGCFWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYDPEKVTYNQLLGLFWSKHDPTTL 82 The following BLAST results are available for this feature:
BLAST of FC920782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920782 ID=FC920782; Name=FC920782; organism=Citrus clementina; type=EST; length=691bpback to top |