FC920782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_THEVU (Peptide methionine sulfoxide reductase msrA OS=Thermoactinomyces vulgaris GN=msrA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 454 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPPTL 690 A FGAGCFWGVE F++VPGV T VGY G NP+YE+VC+ T H EVV+V+YDP++ S++ LL++FW H+P TL Sbjct: 2 ATFGAGCFWGVEETFRQVPGVIDTAVGYMGGTTENPTYEEVCTDKTGHAEVVQVEYDPEQVSYEELLNVFWDNHNPTTL 80
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA1_SYNY3 (Peptide methionine sulfoxide reductase msrA 1 OS=Synechocystis sp. (strain PCC 6803) GN=msrA1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 373 SPDPASTENSAIAQGPD------DDVPAP---GQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 +P+ A SA PD + + AP G + A FG GCFWG E F ++PGV T VGY+ GY NP+Y++VC+G T HNEVV V +DP++ S+D LL +FW H+P Sbjct: 15 APNEALPGRSATMPVPDKHFVNGNPLKAPFPQGMETALFGLGCFWGAERKFWQIPGVYSTAVGYAAGYTPNPTYQEVCTGMTGHNEVVLVAFDPQQVSYDQLLKVFWESHNP 126
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALAR (Peptide methionine sulfoxide reductase msrA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ + +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VRV YDP S++ LL +FW HDP Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYDPAVISYEQLLQVFWENHDP 121
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=msrA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 454 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 A F AGCFWGVE F+++PGVT T VGY+ G+ P+Y VC+G T H E VRV YDP + +++ LLD+FWA HDP Sbjct: 4 ATFAAGCFWGVEETFRKIPGVTGTTVGYTGGHFKEPTYRQVCAGDTGHAEAVRVDYDPDKVTYEQLLDVFWAAHDP 79
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALPB (Peptide methionine sulfoxide reductase msrA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ + +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ YDP S++ LL +FW HDP Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQIFWENHDP 121
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALTY (Peptide methionine sulfoxide reductase msrA OS=Salmonella typhimurium GN=msrA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ + +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ YDP S++ LL FW HDP Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDP 121
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALNS (Peptide methionine sulfoxide reductase msrA OS=Salmonella newport (strain SL254) GN=msrA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ + +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ YDP S++ LL FW HDP Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDP 121
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_KLEP3 (Peptide methionine sulfoxide reductase msrA OS=Klebsiella pneumoniae (strain 342) GN=msrA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VRV YDP+ S++ LL +FW HDP Sbjct: 19 RNTPMPVATLH-AVNGHSMTNVPA-GMEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYDPQVISYEQLLQVFWENHDP 121
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALTO (Peptide methionine sulfoxide reductase msrA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=msrA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 RP P + + + P G A FG GCFWG E F +PGV T VGY+ GY NPSY++VCSG T H EVV V+YDP + +++ LL +FW HDP Sbjct: 20 RPVATPVTEPHEVLGTPLTGPFPE-GTAVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYDEVCSGRTGHAEVVHVRYDPTKITYEDLLKVFWENHDP 123
BLAST of FC920782 vs. ExPASy Swiss-Prot
Match: MSRA_SALSV (Peptide methionine sulfoxide reductase msrA OS=Salmonella schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 367 RPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDP 681 R +P P +T + A+ + +VPA G + A F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ YDP ++ LL +FW HDP Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQIFWENHDP 121 The following BLAST results are available for this feature:
BLAST of FC920782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920782 ID=FC920782; Name=FC920782; organism=Citrus clementina; type=EST; length=691bpback to top |