FC920795

Overview
NameFC920795
Unique NameFC920795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14200 contig Ccv1_Contig14200:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 79/188 (42.02%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH++  ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P+
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPT 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 79/188 (42.02%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH++  ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P+
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPT 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 79/188 (42.02%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH++  ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G A ILA+G A P   V+Q    D YF+ TN +   +LK+K  R+C  +T++ R++ +++E LK+ P +     P++  R DI    V ++  EA+   IK WG+P + ITHVV+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   20 GPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPS 207          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELKQK  R+C  + +  RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELKQK  R+C  + +  RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P+
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPT 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELKQK  R+C  + +  RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPS 202          
The following BLAST results are available for this feature:
BLAST of FC920795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS8_MEDSA8.178e-3542.02Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS5_SOYBN8.178e-3539.89Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS4_MEDSA8.178e-3542.02Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS2_SOYBN8.178e-3539.89Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS2_MEDSA8.178e-3542.02Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHSY_ARATH1.068e-3440.96Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHS5_PEA1.068e-3441.49Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS4_PEA1.068e-3441.49Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]
CHS3_SOYBN1.068e-3439.89Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS3_PEA1.068e-3441.49Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC32013B05EF RVDevelop1 Citrus clementina cDNA clone C32013B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920795 ID=FC920795; Name=FC920795; organism=Citrus clementina; type=EST; length=691bp
GACTGTGGATTCAGGCAGTTTTCCCACACCTCCTGAAAGTTTCATCAACG
TTTCTTTTGATAGAGAAGAAGCATGGGCAGCTTAGCAGGTTTCGCAAATA
AGGCAAGCCCTGGCAAAGCTACCATTCTGGCTCTTGGCAAGGCTTTCCCT
CACCAACTTGTCATGCAGGAATTTCTGGTTGATGGGTACTTCAAGAACAC
CAACTGTGATGATCCCGAGCTCAAGCAGAAGCTAACCCGACTCTGCAAGA
CAACAACGGTTAAAACAAGATATGTAGTCATGTCAGACGAGATCCTGAAG
AAATATCCTGAGCTTGCCATAGAAGGCCTTCCTACTGTGAAGCAAAGGCT
TGATATCTGCAACAAAGCTGTCACCCAAATGGCCATTGAAGCTTCACAAG
CTTGCATCAAGAGCTGGGGCAGGCCAATAACAGACATAACCCACGTAGTT
TATGTCTCCTCAAGTGAAGCTCGGCTGCCTGGGGGTGATCTCTACTTGGC
AAGAGGCCTTGGACTCAGTCCTGAGACTCAGCGTGTCATGCTCTACTTCA
TGGGCTGCTCTGGTGGAGTTTCTGGCCTGCGTGTGGCGAAGGACATTGCT
GAAAACAATCCTGGAAGCAGAGTTCTGCTAGCTACTTCCGAAACTACAAT
TATTGAGTTCAAGCCACCAAGTGCAGAAAGGCCATATGACT
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