FC920795

Overview
NameFC920795
Unique NameFC920795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P+
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPT 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATI+A+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ +++EILK  P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKDNPRVCEYMAPSLAARQDMAVVVVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEETPVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 79/188 (42.02%), Postives = 113/188 (60.11%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P     Q    D YF+ T  +   +LK+K  R+C+ +T+K RY+ +++E LK+ P L     P++  R D+    V ++  EA+   IK WG+P + ITH+++ + S   +PG D   A+ LGL P  +RVMLY +GC  G   LR+AKDIAENN G+RVL+  SE T   F+ PS
Sbjct:   17 GPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYLHLTEEHLKQNPHLCEYNAPSLNTRQDMLVVEVPKLGKEAAINAIKEWGQPKSKITHLIFCTGSSIDMPGADYQCAKLLGLRPSVKRVMLYQLGCYAGGKVLRIAKDIAENNKGARVLIVCSEITACIFRGPS 204          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 78/202 (38.61%), Postives = 123/202 (60.89%), Query Frame = 1
Query:   73 MGSLAGFAN-KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            M S++G    + + G AT+LA+G A P   + Q    D YF+ TN +   +LK+K  R+C+ T +K R++ +++EILK+ P +     P++  R D+  + V ++  EA+   IK WG+P++ ITH+++ ++S   LPG D  L   LGL P  +R M+Y  GC  G + LR+AKD+AENN  +RVL+  SE T + F+ PS
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 78/202 (38.61%), Postives = 123/202 (60.89%), Query Frame = 1
Query:   73 MGSLAGFAN-KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            M S++G    + + G AT+LA+G A P   V Q    D YF+ TN +   +LK+K  R+C+ T +K R++ +++EILK+ P +     P++  R D+  + V ++  EA+   IK WG+P++ ITH+++ ++S   LPG D  L   LGL P  +R M+Y  GC  G + LR+AKD+AENN  +RVL+  SE T + F+ P+
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPN 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+LA+G A P   V Q    D YF+ T  +   ELK+K  R+C  + ++ RY+ +++EIL++ P +     P++  R DI    V ++   A+Q  IK WG+P + ITH+V+ ++S   +PG D  LA+ LGL P   R+M+Y  GC  G + LRVAKD+AENN G+RVL   SE T + F+ PS
Sbjct:   18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEITAVTFRGPS 205          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+LA+G A P   V Q    D YF+ T  +   ELK+K  R+C  + ++ RY+ +++EIL++ P +     P++  R DI    V ++   A+Q  IK WG+P + ITH+V+ ++S   +PG D  LA+ LGL P   R+M+Y  GC  G + LRVAKD+AENN G+RVL   SE T + F+ PS
Sbjct:   18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEITAVTFRGPS 205          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 76/188 (40.43%), Postives = 118/188 (62.77%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V+Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++++LK+ P++     P++  R D+    + ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   18 GPATILAIGTATPANCVIQADYPDFYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEDLLKENPKMCEYMAPSLDARQDMVVVEIRKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFPGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPS 205          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 77/191 (40.31%), Postives = 117/191 (61.26%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAER 681
            G A ILA+G A P   V Q    D YF+ TN     E K+K  R+C  + ++ R++V+++E+LKK P L      ++  R DI    V ++  EA+   IK WGRPI++ITH+V+ ++S   +PG D  L + LGL+   +R+M+Y  GC+ G + LR+AKD+AENN G+RVL+  SE  +  F+ PS ++
Sbjct:   23 GYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVMLSVFRGPSLQQ 213          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 76/195 (38.97%), Postives = 118/195 (60.51%), Query Frame = 1
Query:  100 KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAER 681
            K   G A ILA+G A P   V Q    D YF+ TN     + K+K  R+C  + ++ R++++++E+LKK P L      ++  R DI    V ++  EA+   IK WGRPI++ITH+V+ ++S   +PG D  L + LGL+   +R+M+Y  GC+ G + LR+AKD+AENN G+RVL+  SE  +  F+ PS ++
Sbjct:   17 KRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHMILTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDVAENNKGARVLVVCSEVMLSVFRGPSLQQ 211          
The following BLAST results are available for this feature:
BLAST of FC920795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS1_SOYBN1.068e-3439.89Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS1_MEDSA1.068e-3441.49Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
VPS_HUMLU1.395e-3442.02Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
THS3_ARAHY1.395e-3438.61Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
THS1_ARAHY1.395e-3438.61Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHSY_ORYSJ1.395e-3441.49Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI1.395e-3441.49Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHSY_CHRAE1.395e-3440.43Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHSB_IPOTF1.395e-3440.31Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSB_IPOCO1.395e-3438.97Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]

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Properties
Property NameValue
Genbank descriptionC32013B05EF RVDevelop1 Citrus clementina cDNA clone C32013B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920795 ID=FC920795; Name=FC920795; organism=Citrus clementina; type=EST; length=691bp
GACTGTGGATTCAGGCAGTTTTCCCACACCTCCTGAAAGTTTCATCAACG
TTTCTTTTGATAGAGAAGAAGCATGGGCAGCTTAGCAGGTTTCGCAAATA
AGGCAAGCCCTGGCAAAGCTACCATTCTGGCTCTTGGCAAGGCTTTCCCT
CACCAACTTGTCATGCAGGAATTTCTGGTTGATGGGTACTTCAAGAACAC
CAACTGTGATGATCCCGAGCTCAAGCAGAAGCTAACCCGACTCTGCAAGA
CAACAACGGTTAAAACAAGATATGTAGTCATGTCAGACGAGATCCTGAAG
AAATATCCTGAGCTTGCCATAGAAGGCCTTCCTACTGTGAAGCAAAGGCT
TGATATCTGCAACAAAGCTGTCACCCAAATGGCCATTGAAGCTTCACAAG
CTTGCATCAAGAGCTGGGGCAGGCCAATAACAGACATAACCCACGTAGTT
TATGTCTCCTCAAGTGAAGCTCGGCTGCCTGGGGGTGATCTCTACTTGGC
AAGAGGCCTTGGACTCAGTCCTGAGACTCAGCGTGTCATGCTCTACTTCA
TGGGCTGCTCTGGTGGAGTTTCTGGCCTGCGTGTGGCGAAGGACATTGCT
GAAAACAATCCTGGAAGCAGAGTTCTGCTAGCTACTTCCGAAACTACAAT
TATTGAGTTCAAGCCACCAAGTGCAGAAAGGCCATATGACT
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