FC920816

Overview
NameFC920816
Unique NameFC920816
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 3.916e-101
Identity = 178/193 (92.23%), Postives = 184/193 (95.34%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY ND GAMVP+RVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYSNDNGAMVPIRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.114e-101
Identity = 174/193 (90.16%), Postives = 185/193 (95.85%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            +FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVR+TCR IGF+SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA+LTEVRKN TC+WLRPDGKTQVTVEY+N+ GAMVPVRVHTVLI T
Sbjct:    3 SFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.724e-101
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            +FLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA +DYEKIVRDTCRSIGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPED+GAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY ND GAMVP+RVHTVLI T
Sbjct:    3 SFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.724e-101
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA +DYEKIVRDTCR IGFVS DVGLDAD+C+VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TCSWLRPDGKTQVTVEY+ND GAMVP+RVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNDNGAMVPLRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.139e-100
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCT+TNMVMVFGEITTKA VDYE+IVRDTCRSIGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN  GAMVPVRVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.139e-100
Identity = 174/193 (90.16%), Postives = 182/193 (94.30%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLAT+LGA+LTEVRKN TC WLRPDGKTQVTVEY ND GAMVP+RVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.943e-100
Identity = 176/193 (91.19%), Postives = 183/193 (94.82%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WL+PDGKTQVTVEY ND GAM+P+RVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCRWLKPDGKTQVTVEYCNDNGAMIPIRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.943e-100
Identity = 175/193 (90.67%), Postives = 181/193 (93.78%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVR TCRSIGFVSDDVGLDAD C VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLIST 195          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.943e-100
Identity = 174/197 (88.32%), Postives = 184/197 (93.40%), Query Frame = 2
Query:   74 MRWRTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            M   TFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPL+H+LATKLGARLTEVRKN TC+WLRPDGKTQVT+EY N+ GAMVPVRVHTVLI T
Sbjct:    1 MAAETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLIST 197          
BLAST of FC920816 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.943e-100
Identity = 176/193 (91.19%), Postives = 183/193 (94.82%), Query Frame = 2
Query:   86 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLIFT 664
            TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY ND GAM+P++VHTVLI T
Sbjct:    3 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYCNDNGAMIPIKVHTVLIST 195          
The following BLAST results are available for this feature:
BLAST of FC920816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLLC3.916e-10192.23S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK2_BRAJU5.114e-10190.16S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK2_SUASA8.724e-10190.67S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_SOLLC8.724e-10190.67S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK_LITCN1.139e-10090.67S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_TOBAC1.139e-10090.16S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_SOLBR1.943e-10091.19S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK2_POPTR1.943e-10090.67S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_HORVU1.943e-10088.32S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_SOLTU1.943e-10091.19S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]

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Properties
Property NameValue
Genbank descriptionC32013D06EF RVDevelop1 Citrus clementina cDNA clone C32013D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920816 ID=FC920816; Name=FC920816; organism=Citrus clementina; type=EST; length=698bp
GCTTTGCTATGGGGGTCTGGTCTTAAGGGGGAATCTTAGGTCTGCGCCGA
AACACTTGGCAGCGAGCAGCTTGATGAGATGGAGGACCTTTCTATTCACC
TCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTC
TGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTG
CCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATT
ACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCG
TTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACTGCA
AAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGTGTT
CATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGG
CCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTTTGA
GCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAG
AATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGT
TGAGTACTACAACGACNATGGTGCCATGGTCCCAGTCCGTGTCCACACGG
TCCTCATTTTCACCAGCATGATGAGACTGTCACAATGATGAAATGCTG
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