FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36
Identity = 92/224 (41.07%), Postives = 132/224 (58.93%), Query Frame = 3
Query:   57 PRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGR---RLLVYEYICNGSLDSHLY----GRDRDP---LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            P  F   +LE AT+ F   + + +GG  SV +GVL DG  VAVK+ +    +G++EF SEV  ++  QH+N+V L G+         R LVY+YI N SLD  ++     R R     L W  R ++A+  A+ L YLH +CR   I+H D++P NIL+  +F  +V DFGL++     +  V T + GT GYLAPE+     I+EK+DVYS G+VL+E+I GR
Sbjct:   90 PTKFKLEDLEEATDGFR--SLIGKGGSGSVFKGVLKDGSQVAVKRIE-GEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCR-SKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGR 309          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 80/211 (37.91%), Postives = 126/211 (59.72%), Query Frame = 3
Query:   69 TYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            T+ ++   T    E   +  G   +V++      + +A+K+         +EF +E+E +   +HRN+V L G+ +     LL Y+Y+ NGSL   L+G  +   L+W  R KIAVGAA+GL YLH +C    I+HRD++ +NIL+  +FE  + DFG+A+  P       T VLGT GY+ PEYA++ ++ EK+D+YS G+VL+EL+TG+
Sbjct:  640 TFDDIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPR-IIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGK 849          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 88/213 (41.31%), Postives = 124/213 (58.22%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARW-QPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+++E+E ATN F     + EGG+ S++ G+L   QV A+K     SSQG  E+  EV+VLS  +H N++ LIG C E     LVYEY+  GSL+  L  +D  P L W  R +IA      L +LH   +   +VH D++P NIL+  +    + DFG      P+G   V T V GT  YL PE + SG++T K+DVYS G++L+ L+TGR
Sbjct:  469 FSFSEIEEATNHFDSTLKIGEGGYGSIYVGLLRHTQV-AIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEGWS--LVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSN-KAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGR 677          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 94/244 (38.52%), Postives = 142/244 (58.20%), Query Frame = 3
Query:   18 STCQHKAPVFGNPP-----RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASS-QGDQEFCSEVEVLSCAQHRNVVMLIGFCVE--DGRRLLVYEYICNGSL------DSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP---DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            S   HK P+F N       RW    E   AT+  SE   +  GG   V++  L +G+ VAVK+         ++ F  EV+ L   +HR++V L+G+C    +G  LL+YEY+ NGS+      D  +  + +  L+W AR +IAVG A+G+ YLH +C V  IVHRD++ +N+L+  + E  +GDFGLA+      D +    T    ++GY+APEYA S + TEK+DVYS+G+VL+E++TG+
Sbjct:  922 SQATHK-PLFRNGASKSDIRWEDIME---ATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDC-VPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGK 1160          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 90/229 (39.30%), Postives = 135/229 (58.95%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASS-----QGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLE--------WSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-----DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+++EL  AT  FS  N +  G F  V+RG L DG+ VA+K+ ++ +      + +  F SE+  LS   H+++V L+G+C E   +LLVY+Y+ NG+L  HL+  D++ +E        W  R KIA+ AARG+ YLH    V  I+HRD++ +NIL+  ++   V DFGL+   P            T+  GT GY+ PEY     +T+K+DVY LGVVL+EL+TG+
Sbjct:  484 FSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLH--DKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYA-VPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGK 709          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 83/207 (40.10%), Postives = 127/207 (61.35%), Query Frame = 3
Query:  105 SEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR----WQPDG-DMGVETR---VLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            + AN +  G    V+R  +P G+ +AVK  K+ S +    F SE++ L   +HRN+V L+G+C     +LL Y+Y+ NGSL S L+G  +   ++W AR  + +G A  L YLH +C +  I+H D++  N+L+   FEP + DFGLAR    +   G D+   T    + G++GY+APE+A   +ITEK+DVYS GVVL+E++TG+
Sbjct:  761 TSANVIGTGSSGVVYRITIPSGESLAVK--KMWSKEESGAFNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDC-LPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGK 964          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34
Identity = 92/222 (41.44%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   66 FTYAELELATNRFSE------ANFLAEGGFVSVHRGVLPDGQVVAVKQY----KLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVET-RVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F++ EL+  TN F E       N + EGGF  V++G + +  +VAVK+     ++++ +  Q+F  E++V++  QH N+V L+GF  +     LVY Y+ NGSL   L   D   PL W  R K+A G A G+R+LHE       +HRD++  NIL+  DF   + DFGLAR        V T R++GT  Y+APE A  G+IT K+D+YS GVVL+ELITG
Sbjct:  168 FSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCV-NNTIVAVKKLGAMVEISTEELKQQFDQEIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGSLLDRLSCLDGTPPLSWHTRCKVAQGTANGIRFLHENHH----IHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLELITG 383          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 87/217 (40.09%), Postives = 126/217 (58.06%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ--EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDS--HLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R ++ A+L++AT  FS  N L EG F  V+R    DG+V+AVK+   ++       +F   V  ++   H NV  L+G+C E G+ L+VYE+  NGSL    HL   +   L W++R KIA+G AR L YLHE C    IV ++++  NIL+  +  P + D GLA + P  +   E       GY APE + SGQ + K+D+YS GVV++EL+TGR
Sbjct:  402 RLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPS-IVDKNIKSANILLDSELNPHLSDSGLASFLPTAN---ELLNQTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGR 614          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.420e-34
Identity = 94/222 (42.34%), Postives = 131/222 (59.01%), Query Frame = 3
Query:   66 FTYAELELATNRFSE------ANFLAEGGFVSVHRGVLPDGQVVAVKQYK----LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVET-RVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F++ EL+  TN F E       N + EGGF  V++G + + + VAVK+      +++ +  Q+F  E++V++  QH N+V L+GF  +     LVY Y+ NGSL   L   D   PL W+ R KIA GAA GL YLHE       +HRD++  NIL+  DF   + DFGLAR        V T R++GT  Y+APE A  G+IT K+D+YS GVVL+E+ITG
Sbjct:  169 FSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNRTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHENHH----IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 384          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 85/204 (41.67%), Postives = 119/204 (58.33%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASS-QGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD--RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            AT+  +E   +  G    V+R  L  G+V AVK+   AS  + +Q    E++ +   +HRN++ L GF +     L++Y Y+  GSL   L+G     + L+WSAR  +A+G A GL YLH +C    IVHRD++P NIL+  D EP +GDFGLAR   D  +   T V GT GY+APE A       ++DVYS GVVL+EL+T
Sbjct:  823 ATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPP-IVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTAT-VTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVT 1024          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5005_ARATH5.760e-3641.07Probable receptor-like protein kinase At5g20050 OS... [more]
ERL2_ARATH7.523e-3637.91LRR receptor-like serine/threonine-protein kinase ... [more]
PUB33_ARATH9.826e-3641.31U-box domain-containing protein 33 OS=Arabidopsis ... [more]
GSO1_ARATH9.826e-3638.52LRR receptor-like serine/threonine-protein kinase ... [more]
ACCR3_ARATH9.826e-3639.30Putative serine/threonine-protein kinase-like prot... [more]
Y4265_ARATH6.369e-3540.10Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_MOUSE1.086e-3441.44Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
SRF6_ARATH1.853e-3440.09Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
IRAK4_BOVIN2.420e-3442.34Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
PEPR1_ARATH9.197e-3441.67Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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