FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKNL_MYCBO (Probable serine/threonine-protein kinase pknL OS=Mycobacterium bovis GN=pknL PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 69/211 (32.70%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   78 ELELATNRFSEANFLAEGGFVSVHRGV-LPDGQVVAVKQYKLASSQGDQEFCSE--VEVLSCAQHRNVVMLIGFCV-EDGRR-LLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            E  L  +R+     +A GG  +V+RG+ +   + VA+K    A   GD++F +   +E  + A+  N  ++  +   +DGR   LV E I  G+L   L   +R P+   A   +      GL   H   R G +VHRD++P NIL++ D +  + DFGL R      +     +LGT  YL+PE  + G    ++DVYS+GV++ EL+TG
Sbjct:   11 ESALLDSRYLVQAKIASGGTSTVYRGLDVRLDRPVALKVMD-ARYAGDEQFLTRFRLEARAVARLNNRALVAVYDQGKDGRHPFLVMELIEGGTLRELLI--ERGPMPPHAVVAVLRPVLGGLAAAH---RAG-LVHRDVKPENILISDDGDVKLADFGLVRAVAAASITSTGVILGTAAYLSPEQVRDGNADPRSDVYSVGVLVYELLTG 214          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NTRK1_RAT (High affinity nerve growth factor receptor OS=Rattus norvegicus GN=Ntrk1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 60/190 (31.58%), Postives = 87/190 (45.79%), Query Frame = 3
Query:  165 DGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-------------PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            D  +VAVK  K  S    Q+F  E E+L+  QH+++V   G C E G  L+V+EY+ +G L+  L     D             PL       +A   A G+ YL         VHRD+   N LV       +GDFG++R     D   V  R +    ++ PE     + + ++DV+S GVVL E+ T
Sbjct:  540 DKMLVAVKALKETSENARQDFHREAELLTMLQHQHIVRFFGVCTEGGPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLASL----HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSFGVVLWEIFT 725          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS-LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITG 695
            +  G F +V++G       V + +    + +  Q F +EV VL   +H N+++ +G+  +D   L +    C GS L  HL+ ++    +      IA   A+G+ YLH +     I+HRDM+ NNI +       +GDFGLA    RW   G   VE +  G+  ++APE  +   S   + ++DVYS G+VL EL+TG
Sbjct:   88 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHGGLTVKIGDFGLATVKSRW--SGSQQVE-QPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTG 277          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: DST1_DICDI (Serine/threonine-protein kinase dst1 OS=Dictyostelium discoideum GN=dst1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 58/193 (30.05%), Postives = 94/193 (48.70%), Query Frame = 3
Query:  120 LAEGGFVSVHRGV-LPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            L +G F  V + V   +G+VVA+K   L   +  ++   E+ +L+   + N+V   G   +D +  +V EY   GS+   L  +  D +       I   A +GL YLHE  +    +HRD++  NIL+    E  + DFG++  Q           +GT  ++APE  Q  +   KADV+SLG+  +E+  G
Sbjct:   35 LGKGSFGQVFKAVHFANGKVVAIKIISLDDQEAIKDVRKEISILAECNYPNIVQYFGSYFKDHQLWIVMEYCGGGSVSDLL--QVIDTISEDEIALICREALKGLNYLHEFKK----IHRDIKGGNILLNDRGEVKLADFGVSA-QLFNTFSKRNTFVGTPYWMAPEVIQENKYDGKADVWSLGITAIEMAEG 220          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 63/200 (31.50%), Postives = 102/200 (51.00%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS-LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITG 695
            +  G F +V++G       V + +    + +  Q F +EV VL   +H N+++ +G+  +D   L +    C GS L  HL+ ++    +      IA   A+G+ YLH +     I+HRDM+ NNI +       +GDFGLA    RW   G   VE +  G+  ++APE  +   +   + ++DVYS G+VL EL+TG
Sbjct:  355 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW--SGSQQVE-QPTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LIMKA_DICDI (Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 OS=Dictyostelium discoideum GN=DDB_G0287001 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 64/207 (30.92%), Postives = 109/207 (52.66%), Query Frame = 3
Query:   84 ELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGD-QEFCSEVEVLSC--AQHRNVVMLIGFCVEDGRRLL-VYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE-TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELI 689
            EL+    +  + +A G    V++G+   G+ VA+K Y   +   + +EF  EV ++S   + H N     G   ++ + L  V E + +GSL   L  +++ PL +  +  IA   A  +++LH    +G ++HRD++  N+L+T DF   V DFG +R   + D+  + T  LGT  Y++PE  +     E  DVY+ G+VL E+I
Sbjct:  380 ELSKEEVAFGDVIASGASGKVYKGIYK-GRDVAIKVYSSENFCFNIEEFDREVTIMSLIDSDHPNFTRFYGANKQNKKYLFHVSELVKSGSLRDLLLDKEK-PLAYFTQLSIASDIANAMKHLHS---IG-VIHRDLKSLNVLITEDFTAKVIDFGTSR---NVDLAKQMTLNLGTSCYMSPELFKGNGYDETCDVYAFGIVLWEII 577          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SSK22_YEAST (Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae GN=SSK22 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 71/234 (30.34%), Postives = 112/234 (47.86%), Query Frame = 3
Query:   75 AELELATNRFSEANFLAEGGFVSVHRGV-LPDGQVVAVKQYKLASSQGDQEFC----SEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHL-YGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVG--DFGLARWQPDG-----------DMGVETR----VLGTFGYLAPEYAQSGQITEKA---DVYSLGVVLVELITGR 698
            + L   + R+ + +F+  G F  V+  + L +G+++AVK+ K+  +   ++       E+ VL    H N+V   G  V   +  +  EY   GSL S L +GR  D +     +        GL YLH+      +VHRD++P NIL+  DF  ++   DFG AR                D GVET+    ++GT  Y+APE      +  K    DV++LG V++E+ TGR
Sbjct: 1025 SSLSNVSMRWQKRSFIGGGTFGQVYSAINLENGEILAVKEIKIHDTTTMKKIFPLIKEEMTVLEMLNHPNIVQYYGVEVHRDKVNIFMEYCEGGSLASLLDHGRIEDEM---VTQVYTFELLEGLAYLHQSG----VVHRDIKPENILL--DFNGIIKYVDFGTARTVVGSRTRTVRNAAVQDFGVETKSLNEMMGTPMYMAPETISGSAVKGKLGADDVWALGCVVLEMATGR 1249          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 63/200 (31.50%), Postives = 102/200 (51.00%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS-LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITG 695
            +  G F +V++G       V + +    + +  Q F +EV VL   +H N+++ +G+  +D   L +    C GS L  HL+ ++    +      IA   A+G+ YLH +     I+HRDM+ NNI +       +GDFGLA    RW   G   VE +  G+  ++APE  +   +   + ++DVYS G+VL EL+TG
Sbjct:  355 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW--SGSQQVE-QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 63/200 (31.50%), Postives = 102/200 (51.00%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS-LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITG 695
            +  G F +V++G       V + +    + +  Q F +EV VL   +H N+++ +G+  +D   L +    C GS L  HL+ ++    +      IA   A+G+ YLH +     I+HRDM+ NNI +       +GDFGLA    RW   G   VE +  G+  ++APE  +   +   + ++DVYS G+VL EL+TG
Sbjct:  355 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW--SGSQQVE-QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PK1_STRTO (Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis GN=spk1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 65/198 (32.83%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKL------ASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            +A GG  +V+R V  D ++  V   K+      A +   + F  E + ++   H NVV +     +     L  EYI   +L   L  R+R  L+  A   I       L   H   R G  VHRDM+P N+L+  D    V DFGL R   D        VLGT  YLAPE  + G    + DVY+ G++L E++TG
Sbjct:   24 IAVGGMATVYRAV--DTRLDRVLALKVMHPSLAADASFVERFIREAKSVARLAHPNVVQVFDQGTDGAYVYLAMEYIAGCTLRDVL--RERGALQPRAALDILEPVLAALGAAH---RAG-FVHRDMKPENVLIGDDGRVKVADFGLVR-AVDSVTNTTGTVLGTVSYLAPEQIEHGTADPRVDVYACGILLYEMLTG 212          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PKNL_MYCBO1.631e-1432.70Probable serine/threonine-protein kinase pknL OS=M... [more]
NTRK1_RAT1.631e-1431.58High affinity nerve growth factor receptor OS=Ratt... [more]
MIL_AVIMH1.631e-1432.00Serine/threonine-protein kinase-transforming prote... [more]
DST1_DICDI1.631e-1430.05Serine/threonine-protein kinase dst1 OS=Dictyostel... [more]
RAF1_BOVIN2.130e-1431.50RAF proto-oncogene serine/threonine-protein kinase... [more]
LIMKA_DICDI2.130e-1430.92Probable LIM domain-containing serine/threonine-pr... [more]
SSK22_YEAST2.782e-1430.34Serine/threonine-protein kinase SSK22 OS=Saccharom... [more]
RAF1_PONAB2.782e-1431.50RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_HUMAN2.782e-1431.50RAF proto-oncogene serine/threonine-protein kinase... [more]
PK1_STRTO2.782e-1432.83Serine/threonine-protein kinase PK-1 OS=Streptomyc... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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