FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.040e-47 Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 3 Query: 345 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 VEGVVTL+QED GPTTV VR+TGLTPG HGFHLHE+GDTTNGC+STG+HFNP +THGAP+D+VRHAGDLGNIVA ++GVAEATIVDNQI L GP++V+GRA VVHE Sbjct: 2 VEGVVTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHE 108
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.828e-36 Identity = 68/112 (60.71%), Postives = 79/112 (70.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQE GPTTV V+GL PGPHGFH+H GDTTNGC+STG HFNP HGAP DEVRHAGDLGN+ +G A TIVD QI L GP++++GRA VVH Sbjct: 8 LSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L G+ V GV+ TQE+ GPTTV +++GL PG HGFH+H GDTTNGC+STG H+NP N HGAP+DE RHAGDLGN+ +G AE TIVD QI L G +++GRA VVH Sbjct: 8 LSGSGGVSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.987e-35 Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G V QE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NPN HGAP+D+VRHAGDLGNI +G A TI+D+QI L GPN++VGRA VVH Sbjct: 8 LSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.987e-35 Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G V TQE GPTTV V+GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGNI +G A TI+D+QI L GPN++VGRA VVH Sbjct: 8 LSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.426e-35 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L G ++V+GVV TQE GPTTV +++GL+PG HGFH+H GDTTNGC+STG HFNP HGAP D+ RHAGDLGN+ +G E +I D+QI L GP+++VGRA VVH Sbjct: 10 LNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.780e-35 Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 342 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 NV G++ QE +G PTT++ + GLTPG HGFH+H+YGDTTNGCIS G HFNP N THG P DE+RH GDLGNIVA A+G A I D + L GPN+++GR+ VVH Sbjct: 13 NVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + TQE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NP + HGAP+DE RHAGDLGN+ A A+GVA + D+QI L GPN+++GRA VVH Sbjct: 8 LGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.288e-34 Identity = 68/112 (60.71%), Postives = 79/112 (70.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + TQE G TTV V+GL PG HGFH+H GDTTNGC+STG HFNP THGAP+D RHAGDLGNI +G A TI D+QI LDGPN++VGRA VVH Sbjct: 8 LNSSEGVKGTIFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.196e-34 Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQE GPTTV + GL PG HGFH+H GDTTNGC+STGAHFNPNN HGAP+DE RHAGDLGN+ +G +I D+QI L GPN+++GRA VVH Sbjct: 8 LGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVH 119 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |