FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.066e-33 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L GT +V+G + +QE GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGN+ A +GV I D+QI L GP++++GRA VVH Sbjct: 8 LAGT-DVKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVH 118
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 9.228e-33 Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQ+ PTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A T+ D QI L GP +++GRA VVH Sbjct: 8 LSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.228e-33 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQ GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+D++RHAGDLGN+ +G +I+D+QI L GPN++VGRA VVH Sbjct: 8 LSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32 Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 + GT+ V+GVV TQE D GP V+ +GL G HGFH+HE+GDTTNGC S GAHFNP HGAP+D +RH GDLGN+VA A+G A D ISL+G ++++GR V+HE Sbjct: 7 MTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHE 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32 Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + G +NV+G + Q+ G T V R+TGLTPG HGFH+H GDTTNGC STG HFNP HGAP D RHAGDLGN+VA A+GVAE ++ D QI L G ++++GRA VVH Sbjct: 10 INGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32 Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G TQ PTTVN ++GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH Sbjct: 8 LNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 342 NVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 N+ G + Q+D TT++ + GLTPG HGFH+H+YGDTTNGCIS G HFNP N THG P DE+RH GDLGNIVA A+G A I D + L GPN+++GR+ VVH Sbjct: 58 NINGTIHF-QQDKNSTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVH 163
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.056e-32 Identity = 65/112 (58.04%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + +QE GPTTV V+GL PG HGFH+H GDTTNGC+STG HFNP HGAP D+ RHAGDLGNI +G A TI D QI L G N+V+GRA VVH Sbjct: 8 LSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32 Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 345 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 V G++ Q+ +G PTTV V GLTPG HGFH+H+YGDTTNGCIS G HFNP N THG DE+RH GDLGNI A A+G A +I D I L GPN+++GR+ VVH Sbjct: 14 VSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32 Identity = 61/113 (53.98%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G++ Q+ GP V R+TGL G HGFH+HE+GD T GC S G HFNP + HG P+DE RH GDLGN+ A A+GVA +I D+ ISL G N+++GR VVHE Sbjct: 9 LKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHE 121 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |