FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.349e-43
Identity = 92/180 (51.11%), Postives = 115/180 (63.89%), Query Frame = 1
Query:  124 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSW 651
            N  FMTT+ G  +  +  SL  G RG  LLED+   +KL HF  ERIPERVVHARGA A G F    D S++T A    A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IH+ KP+P + + +    +    DF S  P +L T  W
Sbjct:   51 NGQFMTTDFGGNI-EEQFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFW 229          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.375e-43
Identity = 91/195 (46.67%), Postives = 118/195 (60.51%), Query Frame = 1
Query:   79 NIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI----QEYWRILDFCSHLPESLSTFSW 651
            N  ++  +   +   N  + TTN G  + +D +SL  G RGP LLED+ L EK+ HF  ERIPER+VHARG  A G+F    D S LT AD       +TPV +R STV   RGS +T+RD  GFAVKFYT EGN+DL+GN++PVFFI+DA  FPD +HA K  P++ +      +    DFC   PES  +  W
Sbjct:    2 NKKLEQLEKFKTNDKNPVYSTTNTGVSLSDDANSLKAGPRGPTLLEDFVLREKITHFDHERIPERIVHARGTGAHGYFLSYKDHSKLTKADFLSKQDKKTPVFIRISTVQGPRGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQNEMPTGGSAHDTFYDFCGLKPESAHSVLW 196          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.662e-42
Identity = 90/180 (50.00%), Postives = 113/180 (62.78%), Query Frame = 1
Query:  124 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSW 651
            N  F+T++ G P+  D +SL VG RGP LLED+   +K+  F  ER+PER VHARG  A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP   + I +    +    DF S  P SL T  W
Sbjct:   50 NDTFLTSDVGGPI-EDQNSLQVGDRGPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSSLHTLLW 228          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.662e-42
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 1
Query:  124 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSW 651
            N  FMT++ G P+  D +SL+ G RGP LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A      G QTPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA KP   + I +    +    DF S  P ++ T  W
Sbjct:   51 NDAFMTSDVGGPI-EDQNSLSAGERGPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSTMHTLLW 229          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.703e-42
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +T + G  + ++ +SL+ G++GP+L++DY L+EKLAH  RERIPER VHA+G+ A G  + T D+S  T A +F+  G  TP+ +RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ P FFIRDA KFPD IH  K +P++H++      DF S  PESL
Sbjct:    4 LTNDFGNIIADNQNSLSAGTKGPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQK-GEITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESL 169          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.407e-41
Identity = 83/162 (51.23%), Postives = 113/162 (69.75%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            GAPV +  +S+T G RGP+L++D + +E++AHF RE IPER +HA+G+ A G F  T+DI+  TCA +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   FP + H  K NPK+++++     DF + LPE+L
Sbjct:   10 GAPVSDRENSMTAGPRGPLLMQDIYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTCASIFAEVGKQTEMFARFSTVAGERGAGDAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPKTNMKDPQANWDFWTLLPEAL 171          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.400e-41
Identity = 87/177 (49.15%), Postives = 111/177 (62.71%), Query Frame = 1
Query:  133 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSW 651
            ++TT+ G P+  D  SL  G+RG  LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IHA KP     I +    +    DF S  P +L T  W
Sbjct:   52 YLTTDVGGPI-EDQQSLKAGARGSTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKPKGDREIPQAATAHDAAWDFFSQQPSTLHTLLW 227          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.121e-41
Identity = 85/167 (50.90%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +T   GAPV ++ +SLT G RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD  KFPD+  A K +P+++++      DF + LPE+L
Sbjct:   15 LTMGNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEAL 181          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.654e-40
Identity = 81/167 (48.50%), Postives = 115/167 (68.86%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +T+  GAPV +  +S+T G RGP+L++D++ +E++AHF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  + HA K +P+++++      DF + LPE+L
Sbjct:    7 LTSLFGAPVSDRENSMTAGPRGPLLMQDWYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTSASIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFASLNHAIKRDPRTNMRSAQNNWDFWTSLPEAL 173          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 165.236 bits (417), Expect = 2.654e-40
Identity = 84/170 (49.41%), Postives = 110/170 (64.71%), Query Frame = 1
Query:  127 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H+++     D+ +   ES+
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTTNEESV 171          
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT3_NEUCR3.349e-4351.11Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATB_DICDI4.375e-4346.67Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATB_ASPOR1.662e-4250.00Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATB_ASPFU1.662e-4249.44Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_CAMJE3.703e-4251.50Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_STAXY1.407e-4151.23Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATB_EMENI2.400e-4149.15Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_HAEIN9.121e-4150.90Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_STAS12.654e-4048.50Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]
CATA_CANTR2.654e-4049.41Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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