FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.166e-50
Identity = 97/174 (55.75%), Postives = 125/174 (71.84%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TT +G PV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGNWD++GN+ PVFFIRD +KFPD IH  K  P+S+++    + DF SH PE+L   +  F
Sbjct:    7 LTTASGPPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILF 180          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.166e-50
Identity = 97/171 (56.73%), Postives = 123/171 (71.93%), Query Frame = 1
Query:  139 TTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSW 651
            TT  GAPVW+DN+ +T G RGPVLL+    +EKLA F RERIPERVVHA+G+ A G F  T DI+  T A +F   G +T    RFSTV  ERGS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++  +  + DF S++PESL   +W
Sbjct:    9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTW 179          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 100/183 (54.64%), Postives = 121/183 (66.12%), Query Frame = 1
Query:  124 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNP-------KSHIQEYWRILDFCSHLPESLSTFSW 651
            + P +TT  G PV +D +SL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGNWDL+GN+IPVFFI+DAIKFPDVIH+ KP P       +S    +W   DF S  PES+    W
Sbjct:   36 DTPVLTTAQGGPVADDQNSLRAGERGPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFW---DFISLTPESMHMIMW 215          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 96/177 (54.24%), Postives = 128/177 (72.32%), Query Frame = 1
Query:  127 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            A  +TT AG PV +  + +TVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H+++   + DF S  PESL   S+ F
Sbjct:   24 ADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 200          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 94/174 (54.02%), Postives = 125/174 (71.84%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TT AG P+ +  +++T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGNWDL GN+ P FFIRD +  P  IH+ K NP++H+++   + DF S  PESL   S+ F
Sbjct:   27 LTTGAGVPIGDKLNAMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 200          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 99/199 (49.75%), Postives = 134/199 (67.34%), Query Frame = 1
Query:   67 SSARNIAMDPYKLLPS--TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            + +R+ A D  KL            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F
Sbjct:    2 ADSRDPASDQMKLWKEQRAAQKPDVLTTGGGNPIGDKLNVMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 200          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 98/167 (58.68%), Postives = 122/167 (73.05%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESL 175          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 98/167 (58.68%), Postives = 122/167 (73.05%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESL 175          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 98/167 (58.68%), Postives = 122/167 (73.05%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESL 175          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.404e-49
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 1
Query:  127 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            A  +TT AG PV +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H++    + DF S  PESL   S+ F
Sbjct:   24 ADVLTTGAGNPVGDKLNVITAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFLF 200          
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_ONCVE2.166e-5055.75Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_HELPY2.166e-5056.73Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATE_RHIME2.829e-5054.64Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_PONAB2.829e-5054.24Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_DANRE3.695e-5054.02Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_CANFA4.825e-5049.75Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_BORPE4.825e-5058.68Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA4.825e-5058.68Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR4.825e-5058.68Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_CALJA1.404e-4953.67Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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